Factsheet for GSMUA_Achr8P33890_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 6
plasma membrane 5
golgi 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr3P00940_001
GSMUA_Achr3P13410_001
GSMUA_Achr3P27250_001
GSMUA_Achr4P11940_001
GSMUA_Achr5P10770_001
GSMUA_Achr6P04010_001
GSMUA_Achr6P04030_001
GSMUA_Achr8P33890_001
GSMUA_Achr9P23710_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62600.1	GSMUA_Achr3P00940_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr3P13410_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr6P04010_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr6P04030_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr11P...	AT3G62600.1	19763086
AT3G62600.1	GSMUA_Achr8P33890_001	AT3G62600.1	19763086
AT3G62600.1	GSMUA_Achr3P27250_001	AT5G28540.1	19763086
AT3G62600.1	GSMUA_Achr4P11940_001	AT5G28540.1	19763086
AT3G62600.1	GSMUA_Achr5P10770_001	AT5G28540.1	19763086
AT3G62600.1	GSMUA_Achr9P23710_001	AT5G28540.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0156500-01	Rice	cytosol, nucleus	34.59	81.51
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	80.81	80.58
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	87.21	80.43
EES17752	Sorghum	endoplasmic reticulum, golgi	80.52	79.14
Zm00001d009783_P004	Maize	mitochondrion	79.65	78.29
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	77.91	77.68
Solyc01g079610.2.1	Tomato	nucleus	77.62	77.39
TraesCS1B01G125100.1	Wheat	nucleus	78.49	77.14
TraesCS1D01G107200.1	Wheat	nucleus	78.49	77.14
TraesCS1A01G099300.1	Wheat	nucleus	78.2	76.86
Bra007687.1-P	Field mustard	golgi	75.58	75.14
CDX76646	Canola	golgi	75.58	75.14
CDY11430	Canola	golgi	75.58	75.14
CDX89142	Canola	endoplasmic reticulum	74.71	74.06
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	74.42	73.99
Zm00001d037586_P001	Maize	endoplasmic reticulum	78.78	73.84
CDY63310	Canola	endoplasmic reticulum	74.42	73.78
CDY59898	Canola	endoplasmic reticulum, golgi	74.13	73.49
CDX67894	Canola	endoplasmic reticulum, golgi	68.02	71.56
KRH55068	Soybean	cytosol	28.49	71.53
KXG32445	Sorghum	endoplasmic reticulum	70.06	69.65
Bra003501.1-P	Field mustard	nucleus	70.64	65.5
HORVU1Hr1G022990.1	Barley	cytosol	76.16	61.65
Zm00001d009210_P001	Maize	endoplasmic reticulum	61.63	52.22
Bra014400.1-P	Field mustard	golgi	73.55	37.87
GSMUA_AchrUn_...	Banana	cytosol	31.4	36.12
GSMUA_Achr3P15480_001	Banana	cytosol	30.52	35.96
GSMUA_AchrUn_...	Banana	cytosol	15.41	35.33
GSMUA_Achr8P16030_001	Banana	cytosol	33.72	35.05
GSMUA_Achr11P...	Banana	cytosol	35.17	31.76
GSMUA_Achr6P29960_001	Banana	nucleus	37.79	31.4
GSMUA_Achr2P19740_001	Banana	cytosol	29.36	31.37
GSMUA_Achr9P25940_001	Banana	nucleus	37.79	31.18
GSMUA_Achr4P12330_001	Banana	nucleus	29.65	31.1
GSMUA_Achr8P11020_001	Banana	nucleus	35.76	30.75
GSMUA_Achr4P22790_001	Banana	cytosol	36.63	30.14
GSMUA_Achr6P13820_001	Banana	cytosol	14.83	29.82
GSMUA_Achr4P31390_001	Banana	cytosol	35.76	29.57
GSMUA_Achr7P01290_001	Banana	nucleus	35.76	29.5
GSMUA_AchrUn_...	Banana	cytosol	27.62	29.41
GSMUA_Achr11P...	Banana	cytosol	31.69	29.14
GSMUA_Achr1P01630_001	Banana	cytosol	20.06	29.11
GSMUA_Achr9P23300_001	Banana	cytosol	28.78	28.78
GSMUA_Achr6P15600_001	Banana	cytosol	31.98	24.89
GSMUA_Achr7P03030_001	Banana	cytosol	21.8	23.58
GSMUA_Achr1P15780_001	Banana	plastid	29.36	22.7
GSMUA_Achr4P11580_001	Banana	mitochondrion	28.49	21.68
GSMUA_Achr3P00920_001	Banana	mitochondrion	28.49	21.68
GSMUA_Achr3P00410_001	Banana	mitochondrion	27.91	21.33
GSMUA_Achr11P...	Banana	plastid	27.91	19.59
GSMUA_Achr4P12400_001	Banana	mitochondrion	26.45	19.44
GSMUA_Achr4P20410_001	Banana	cytosol	28.49	18.67
GSMUA_Achr6P02160_001	Banana	mitochondrion	23.26	16.91
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	26.45	16.7
GSMUA_Achr8P32540_001	Banana	mitochondrion	11.63	14.39

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.1.2.1.2	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr8G33890_001	EnsemblPlants:GSMUA_Achr8P33890_001	EnsemblPlants:GSMUA_Achr8T33890_001	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0TVZ1	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR43888	PANTHER:PTHR43888:SF14	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SignalP:SignalP-noTM	UniParc:UPI000295878B	SEG:seg	:

Description

Putative DnaJ homolog subfamily B member 11 [Source:GMGC_GENE;Acc:GSMUA_Achr8G33890_001]

Coordinates

chr8:+:34814372..34820381

Molecular Weight (calculated)

38932.7 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.618

Length

344 amino acids

Sequence
(BLAST)

001: MAPLARGLLL LALLLAHALC APGGKSYYDV LQVPKGASED QIKRAYRKLA LKYHPDKNQG NEEANKRFAE INNAYEVLSD SEKRKIYDRY GEEGLKQYAG
101: GGGRGSGMNI QDIFNSFFGN GQNDEEEEVT PKGDDVVVEL DATLEDLYMG GTLKVWREKN VIKPAPGKRR CNCRNEVYHR QIAPGMFQQM TEMVCEQCPN
201: VKFEREGYFI TVDIEKGMQD GQEVLFYEDG EPKIDGEAGD LKFRIQTAPH ERFRREGNDL HMTVTISLLQ ALVGFEKTIK HLDEHLVEIG TKGITKPKEI
301: RKFKGEGMPI HMSTKKGDLY LTYEVLFPKS LTEDQKTKIK AVLS

Best Arabidopsis Sequence Match ( AT3G62600.1 )
(BLAST)

001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Arabidopsis Description

ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.