Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g053620.2.1 | Tomato | nucleus | 48.54 | 37.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.41 | 34.67 |
| GSMUA_Achr3P15480_001 | Banana | cytosol | 50.88 | 29.79 |
| GSMUA_Achr8P16030_001 | Banana | cytosol | 52.63 | 27.19 |
| Zm00001d009556_P001 | Maize | cytoskeleton, cytosol, nucleus | 54.97 | 26.78 |
| Os05t0562300-01 | Rice | nucleus | 56.14 | 26.52 |
| Zm00001d039000_P001 | Maize | mitochondrion | 55.56 | 26.24 |
| EES19943 | Sorghum | cytosol | 55.56 | 26.24 |
| TraesCS1D01G403500.1 | Wheat | cytosol | 53.8 | 25.48 |
| PGSC0003DMT400024267 | Potato | cytoskeleton, cytosol, nucleus | 50.88 | 25.44 |
| HORVU1Hr1G087070.1 | Barley | cytosol | 54.39 | 25.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.86 | 25.08 |
| TraesCS1A01G395300.1 | Wheat | cytosol | 53.22 | 24.46 |
| TraesCS1B01G423600.1 | Wheat | cytosol | 53.8 | 24.34 |
| GSMUA_Achr2P19740_001 | Banana | cytosol | 45.61 | 24.22 |
| GSMUA_Achr4P12330_001 | Banana | nucleus | 45.61 | 23.78 |
| GSMUA_Achr11P... | Banana | cytosol | 50.88 | 23.26 |
| GSMUA_Achr9P23300_001 | Banana | cytosol | 44.44 | 22.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.94 | 21.67 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 49.12 | 19.0 |
| GSMUA_Achr1P01630_001 | Banana | cytosol | 26.32 | 18.99 |
| GSMUA_Achr11P... | Banana | cytosol | 34.5 | 15.49 |
| GSMUA_Achr8P33890_001 | Banana | endoplasmic reticulum | 29.82 | 14.83 |
| GSMUA_Achr9P25940_001 | Banana | nucleus | 35.67 | 14.63 |
| GSMUA_Achr4P31390_001 | Banana | cytosol | 35.09 | 14.42 |
| GSMUA_Achr7P01290_001 | Banana | nucleus | 35.09 | 14.39 |
| GSMUA_Achr4P22790_001 | Banana | cytosol | 35.09 | 14.35 |
| GSMUA_Achr8P11020_001 | Banana | nucleus | 33.33 | 14.25 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 30.99 | 14.21 |
| GSMUA_Achr6P29960_001 | Banana | nucleus | 33.92 | 14.01 |
| GSMUA_Achr1P15780_001 | Banana | plastid | 33.92 | 13.03 |
| GSMUA_Achr3P00920_001 | Banana | mitochondrion | 33.33 | 12.61 |
| GSMUA_Achr11P... | Banana | plastid | 35.09 | 12.24 |
| GSMUA_Achr7P03030_001 | Banana | cytosol | 21.05 | 11.32 |
| GSMUA_Achr4P20410_001 | Banana | cytosol | 34.5 | 11.24 |
| GSMUA_Achr4P11580_001 | Banana | mitochondrion | 26.9 | 10.18 |
| GSMUA_Achr3P00410_001 | Banana | mitochondrion | 26.32 | 10.0 |
| GSMUA_Achr6P02160_001 | Banana | mitochondrion | 26.9 | 9.73 |
| GSMUA_Achr4P12400_001 | Banana | mitochondrion | 25.73 | 9.4 |
| GSMUA_Achr9P29030_001 | Banana | mitochondrion, plastid | 29.82 | 9.36 |
| GSMUA_Achr8P32540_001 | Banana | mitochondrion | 8.19 | 5.04 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P13820_001 | EnsemblPlants:GSMUA_Achr6T13820_001 | EnsemblPlantsGene:GSMUA_Achr6G13820_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 | PFAM:PF00226 |
| PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI000295AC61 | UniProt:M0T6T0 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G13820_001]
Coordinates
chr6:-:9189755..9190346
Molecular Weight (calculated)
18397.3 Da
IEP (calculated)
5.027
GRAVY (calculated)
-0.642
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKILG VDKSAEDDDL RKAYRKFAMR WHPDKNPNNK NEAEAKFKQI SEAYEVLSDP QKRAAYDQYG EEGLKGQVPP PGAGDTTFFS GSDVGAASFR
101: FRSVDDNFTE FFGFPSPFCG GAMGGSWFPG GMGGVTVSNC SAVALRSSRL GSGPEGGGQR RGSLLEPAES P
101: FRSVDDNFTE FFGFPSPFCG GAMGGSWFPG GMGGVTVSNC SAVALRSSRL GSGPEGGGQR RGSLLEPAES P
001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
Arabidopsis Description
At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.