CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039000_P001	Maize	mitochondrion	97.79	97.79
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	90.61	93.45
Os05t0562300-01	Rice	nucleus	91.99	91.99
TraesCS1D01G403500.1	Wheat	cytosol	86.19	86.43
HORVU1Hr1G087070.1	Barley	cytosol	87.57	85.91
TraesCS1A01G395300.1	Wheat	cytosol	86.74	84.41
TraesCS1B01G423600.1	Wheat	cytosol	87.85	84.13
GSMUA_Achr3P15480_001	Banana	cytosol	66.85	82.88
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	70.17	74.27
EES02163	Sorghum	cytosol	67.13	72.11
Solyc07g053620.2.1	Tomato	nucleus	42.27	68.3
EES17644	Sorghum	cytosol	56.08	64.86
EES14600	Sorghum	cytosol	54.7	57.73
GSMUA_Achr6P13820_001	Banana	cytosol	26.24	55.56
EES13688	Sorghum	cytosol	50.55	51.55
KXG29372	Sorghum	cytosol	46.13	49.41
EES01846	Sorghum	cytosol	34.53	37.99
EES17752	Sorghum	endoplasmic reticulum, golgi	34.25	35.43
KXG32445	Sorghum	endoplasmic reticulum	31.22	32.66
EES19566	Sorghum	cytosol	30.66	32.65
KXG37403	Sorghum	cytosol	36.19	31.34
EER93745	Sorghum	nucleus	35.08	30.31
EES07516	Sorghum	nucleus	33.98	29.29
OQU82085	Sorghum	nucleus	32.87	28.47
EES13204	Sorghum	plastid	30.39	24.55
EER89093	Sorghum	mitochondrion, plastid	27.35	22.76
KXG31305	Sorghum	plastid	30.66	22.33
EES15725	Sorghum	mitochondrion, plastid	25.14	21.72
KXG19604	Sorghum	mitochondrion	25.97	20.22
OQU92981	Sorghum	plastid	27.62	18.55

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EntrezGene:8074590	UniProt:C5YVI9	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlants:EES19943	ProteinID:EES19943	ProteinID:EES19943.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	SMART:SM00271
EnsemblPlantsGene:SORBI_3009G231400	SUPFAM:SSF46565	SUPFAM:SSF49493	unigene:Sbi.16525	UniParc:UPI0001A89267	RefSeq:XP_002441513.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:57129196..57131719

Molecular Weight (calculated)

38747.3 Da

IEP (calculated)

9.447

GRAVY (calculated)

-0.522

Length

362 amino acids

Sequence
(BLAST)

001: MGLDYYKILG VDKGATDDDL KKAYRKLAMK WHPDKNPNNK KEAENKFKQI SEAYEVLSDP QKRAVYDQYG EEGLKGQVPP PGAGGAGPGG ATFFSTGGDG
101: PNVFRFNPRN AEDIFAEFFG GSSPFGGMGG GGMGGSGMGG GMPGMRTGGT RFSSSIFGDD IFGSAFGGGP DGYGMHTGGR PVKAPAIERK LPCSLEELYK
201: GTTKKMKISR EIADASGKTI PVEEILTIDV KPGWKKGTKI TFPEKGNETP NTIPADLVFI IDEKPHPVFT RDGNDLVVTQ KIPLAEALTG YTAHVTTLDG
301: RSLTVPISSV IHPGYEEVVR GEGMPIPKDP SRKGNLRIKF DIKFPARLTS DQKAGVKRLL GQ

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.