CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G115000.1	Wheat	plastid	85.27	92.05
Os05t0334400-01	Rice	mitochondrion, plastid	91.07	91.28
Os05t0334000-01	Rice	mitochondrion, plastid	91.07	91.28
Os05t0333500-01	Rice	mitochondrion, plastid	91.07	91.28
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	96.43	87.27
Solyc01g105340.2.1	Tomato	plastid	63.62	80.74
TraesCS5B01G115900.1	Wheat	plastid	85.49	79.3
GSMUA_Achr1P15780_001	Banana	plastid	75.89	76.4
GSMUA_Achr3P00920_001	Banana	mitochondrion	75.67	75.0
PGSC0003DMT400032760	Potato	plastid	71.43	71.91
TraesCS5D01G125500.1	Wheat	nucleus	85.49	71.19
KRH59311	Soybean	plastid	68.75	71.13
KRH43163	Soybean	plastid	68.97	70.71
KRH31310	Soybean	nucleus, plastid	67.86	69.09
KRG97564	Soybean	plastid	67.41	68.64
AT4G39960.1	Thale cress	mitochondrion, plastid	68.3	68.46
Bra030245.1-P	Field mustard	plastid	68.3	67.7
CDX89453	Canola	plastid	68.3	67.7
AT2G22360.1	Thale cress	plastid	66.74	67.65
CDY25588	Canola	plastid	68.3	67.4
VIT_00s0324g00040.t01	Wine grape	plastid	72.32	67.36
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	85.94	66.04
GSMUA_Achr4P20410_001	Banana	cytosol	75.45	64.38
CDY63891	Canola	cytosol	67.19	61.93
CDX69371	Canola	mitochondrion	66.96	59.88
Bra011820.1-P	Field mustard	cytosol	66.96	56.71
KXG31305	Sorghum	plastid	46.65	42.05
EER89093	Sorghum	mitochondrion, plastid	34.38	35.4
EES15725	Sorghum	mitochondrion, plastid	30.8	32.94
EES17644	Sorghum	cytosol	22.32	31.95
OQU92981	Sorghum	plastid	38.39	31.91
EES14600	Sorghum	cytosol	24.11	31.49
EES02163	Sorghum	cytosol	23.44	31.16
EES19943	Sorghum	cytosol	24.55	30.39
EES17752	Sorghum	endoplasmic reticulum, golgi	21.88	28.0
OQU82085	Sorghum	nucleus	25.89	27.75
KXG29372	Sorghum	cytosol	20.54	27.22
KXG32445	Sorghum	endoplasmic reticulum	20.98	27.17
KXG37403	Sorghum	cytosol	25.22	27.03
EES07516	Sorghum	nucleus	25.0	26.67
EER93745	Sorghum	nucleus	24.78	26.49
EES13688	Sorghum	cytosol	20.98	26.48
KXG19604	Sorghum	mitochondrion	27.23	26.24
EES01846	Sorghum	cytosol	14.06	19.15
EES19566	Sorghum	cytosol	13.84	18.24

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:8064340	UniProt:C5YLG9
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlants:EES13204	ProteinID:EES13204
ProteinID:EES13204.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43096	SMART:SM00271	EnsemblPlantsGene:SORBI_3007G005400	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
unigene:Sbi.20844	TIGRFAMs:TIGR02349	UniParc:UPI0001A876C9	RefSeq:XP_002443709.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:468976..473818

Molecular Weight (calculated)

48175.3 Da

IEP (calculated)

9.952

GRAVY (calculated)

-0.498

Length

448 amino acids

Sequence
(BLAST)

001: MALVQFNGAL VPQLGEKPRL LSSSPAVARA TYADARFLTP KTGSRGRGKH LLSPSYSLHS QTSSEQLNHV PSSRFRQKRG SRFVVRAEAD FYSVLGVSRN
101: ASKSEIKSAY RKLARSYHPD VNKDPGAEQK FKDISNAYEV LSDDEKRSIY DKYGEAGLKG AGMGTGDYSN PFDLFESLFE GFGGMGGMGG GRAARNRPMQ
201: GDDESYNLVL NFKEAVFGVE KEIEITRLEG CNTCDGSGAK PGTKATTCKT CGGQGQVVSS TRTPLGIFQQ VSTCNTCGGT GEFSTPCNTC GGDGRVRRTK
301: RISLKVPAGV DSGSRLRVRS EGNAGRRGGP PGDLYVFIDV LSDPVLKRDG TNILYTCKVS YIDAILGTTV KVPTVDGMVD LKIPSGTQPG TTLVMSKKGV
401: PLLGKSNARG DQLVRVQVEI PKRLSSDEKK LIEELANLNK AQTANSRR

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.