Factsheet for Bra011820.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
extracellular 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G39960.1	Thale cress	mitochondrion, plastid	80.34	95.08
CDY63891	Canola	cytosol	86.2	93.83
CDX69371	Canola	mitochondrion	86.2	91.02
Bra030245.1-P	Field mustard	plastid	71.27	83.41
Solyc01g105340.2.1	Tomato	plastid	50.85	76.2
KRH59311	Soybean	plastid	60.49	73.9
KRH43163	Soybean	plastid	60.3	73.0
KRH31310	Soybean	nucleus, plastid	60.3	72.5
KRG97564	Soybean	plastid	59.17	71.14
VIT_00s0324g00040.t01	Wine grape	plastid	64.08	70.48
PGSC0003DMT400032760	Potato	plastid	58.03	68.99
TraesCS5A01G115000.1	Wheat	plastid	53.88	68.67
EES13204	Sorghum	plastid	56.71	66.96
Os05t0334400-01	Rice	mitochondrion, plastid	56.52	66.89
Os05t0334000-01	Rice	mitochondrion, plastid	56.52	66.89
Os05t0333500-01	Rice	mitochondrion, plastid	56.52	66.89
GSMUA_Achr1P15780_001	Banana	plastid	56.14	66.74
GSMUA_Achr3P00920_001	Banana	mitochondrion	56.71	66.37
Zm00001d047195_P001	Maize	mitochondrion	38.56	61.82
Zm00001d024635_P001	Maize	mitochondrion	57.09	61.26
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	56.9	60.81
TraesCS5B01G115900.1	Wheat	plastid	54.82	60.04
GSMUA_Achr4P20410_001	Banana	cytosol	59.36	59.81
TraesCS5D01G125500.1	Wheat	nucleus	55.2	54.28
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	55.95	50.77
Bra035201.1-P	Field mustard	plastid	37.81	39.92
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	31.19	36.03
Bra020721.1-P	Field mustard	mitochondrion	26.46	31.32
Bra037514.1-P	Field mustard	mitochondrion	25.9	30.31
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	18.15	29.91
Bra031127.1-P	Field mustard	cytosol	18.71	29.29
Bra020505.1-P	Field mustard	cytosol	18.15	28.83
Bra029729.1-P	Field mustard	nucleus	17.39	28.05
Bra007687.1-P	Field mustard	golgi	18.15	27.75
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	17.01	27.61
Bra011031.1-P	Field mustard	cytosol	18.34	27.56
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	17.39	27.54
Bra009848.1-P	Field mustard	cytosol	16.45	27.53
Bra018443.1-P	Field mustard	nucleus	17.77	26.93
Bra033783.1-P	Field mustard	cytosol	16.26	26.46
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	16.82	26.18
Bra018099.1-P	Field mustard	cytosol	16.26	25.75
Bra010892.1-P	Field mustard	mitochondrion	20.79	25.58
Bra002385.1-P	Field mustard	nucleus	20.23	25.36
Bra006608.1-P	Field mustard	nucleus	19.28	25.0
Bra002386.1-P	Field mustard	nucleus	19.85	24.88
Bra020169.1-P	Field mustard	nucleus	19.85	24.82
Bra003501.1-P	Field mustard	nucleus	17.01	24.26
Bra019519.1-P	Field mustard	cytosol	15.12	24.1
Bra010365.1-P	Field mustard	mitochondrion	15.31	20.88
Bra014400.1-P	Field mustard	golgi	20.79	16.47
Bra036942.1-P	Field mustard	nucleus	10.4	15.76
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	10.59	15.47
Bra018413.1-P	Field mustard	nucleus	9.83	12.94
Bra019886.1-P	Field mustard	nucleus	9.83	12.01

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.25.40.10	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra011820
EnsemblPlants:Bra011820.1	EnsemblPlants:Bra011820.1-P	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628
GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR002885
InterPro:IPR011990	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4D5R3	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01535	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	InterPro:Pentatricopeptide_repeat	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	TIGRFAMs:TIGR02349	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002546236	SEG:seg	:

Description

AT4G39960 (E=1e-208) | DNAJ heat shock family protein

Coordinates

chrA01:+:376947..382259

Molecular Weight (calculated)

57065.1 Da

IEP (calculated)

8.718

GRAVY (calculated)

-0.313

Length

529 amino acids

Sequence
(BLAST)

001: MVVSACAELT WHHVGCFVHG LVLKHGGFER NCAVGASFVY FYSKCGFLED ARNVFDEMPE RDVFAWTAVI NGHVQNGECD MALIQFGSSS CVAQWGIRRP
101: HVAVKASYYP TRLESHQDNS CISQINCLGA SQSSMFSHGS LPFLSLVTGQ SRNAHSRRGA RFTVRADTDF YSVLGVSKTA TKAEIKSAYR KLARSYHPDV
201: NKDAGAEGKF KEISNAYEIL SDDEKRSLYD RYGEAGVKGA GMGGMGDYSN PFDLFESLFE GMGGMGGGMG SRGGSRSRAI DGEDEYYSLI LDFKEAVFGI
301: EKEIEISRLE SCGTCNGSGA KAGTKPTKCK TCGGQGQVVA STRTPLGVFQ QVMTCSPCNG TGEVSKPCGA CSGDGRVRRT KRISLKVPAG VDSGSRLRVR
401: GEGNAGKRGG SSGDLFAVIE VIPDPILKRD DTNILYTCKI SYVDAILGTT LKVPTVDGTV DLKVPAGTQP STTLVMAKKG VPVLNKSKMR GDQLVRVQVE
501: IPKRLSKEEK KLVEELADMS KNKVANSRR

Best Arabidopsis Sequence Match ( AT4G39960.1 )
(BLAST)

001: MALIQFGSSC VAQWGILRPR FAVKAFYPSR LESHQDNCIS QINCLGASRS SMFAQGSLPF LSLTGVSPNT HSRRGARFTV RADTDFYSVL GVSKNATKAE
101: IKSAYRKLAR SYHPDVNKDA GAEDKFKEIS NAYEILSDDE KRSLYDRYGE AGVKGAGMGG MGDYSNPFDL FESLFEGMGG MGGMGGGMGS RGSRSRAIDG
201: EDEYYSLILN FKEAVFGIEK EIEISRLESC GTCNGSGAKA GTKPTKCKTC GGQGQVVAST RTPLGVFQQV MTCSPCNGTG EISKPCGACS GDGRVRRTKR
301: ISLKVPAGVD SGSRLRVRGE GNAGKRGGSP GDLFAVIEVI PDPVLKRDDT NILYTCKISY VDAILGTTLK VPTVDGEVDL KVPAGTQPST TLVMAKKGVP
401: VLNKSKMRGD QLVRVQVEIP KRLSKEEKML VEELADMSKN KVANSRR

Arabidopsis Description

AT4g39960/T5J17_130 [Source:UniProtKB/TrEMBL;Acc:Q940V1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.