Factsheet for Bra018099.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36915	Canola	cytosol	99.7	99.7
Bra033783.1-P	Field mustard	cytosol	87.72	90.15
Bra019519.1-P	Field mustard	cytosol	86.83	87.35
CDY24146	Canola	cytosol	95.51	84.62
AT3G47940.1	Thale cress	cytosol	84.13	80.29
KRH63415	Soybean	cytosol	35.03	79.59
KRH54495	Soybean	nucleus	73.35	69.8
PGSC0003DMT400083040	Potato	cytosol	68.26	67.66
Solyc06g071110.2.1	Tomato	nucleus	66.77	66.17
VIT_17s0000g05530.t01	Wine grape	cytoskeleton, cytosol, nucleus	68.86	65.9
KRH63417	Soybean	nucleus	37.72	62.07
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	55.99	58.26
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	58.98	57.94
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	56.59	56.59
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	55.09	56.44
Bra029729.1-P	Field mustard	nucleus	55.09	56.1
Bra018443.1-P	Field mustard	nucleus	58.08	55.59
Bra009848.1-P	Field mustard	cytosol	51.5	54.43
Bra011031.1-P	Field mustard	cytosol	56.59	53.69
Bra031127.1-P	Field mustard	cytosol	54.19	53.55
Bra020505.1-P	Field mustard	cytosol	50.9	51.05
Bra010365.1-P	Field mustard	mitochondrion	45.51	39.18
Bra007687.1-P	Field mustard	golgi	31.14	30.06
Bra003501.1-P	Field mustard	nucleus	30.84	27.76
Bra006608.1-P	Field mustard	nucleus	33.83	27.7
Bra018413.1-P	Field mustard	nucleus	32.04	26.62
Bra002385.1-P	Field mustard	nucleus	33.23	26.3
Bra002386.1-P	Field mustard	nucleus	32.93	26.07
Bra020169.1-P	Field mustard	nucleus	32.63	25.77
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.84	25.69
Bra019886.1-P	Field mustard	nucleus	32.63	25.17
Bra036942.1-P	Field mustard	nucleus	25.15	24.07
Bra020721.1-P	Field mustard	mitochondrion	25.75	19.24
Bra030245.1-P	Field mustard	plastid	25.75	19.03
Bra037514.1-P	Field mustard	mitochondrion	25.45	18.81
Bra035201.1-P	Field mustard	plastid	28.14	18.76
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	24.25	17.69
Bra010892.1-P	Field mustard	mitochondrion	22.16	17.21
Bra011820.1-P	Field mustard	cytosol	25.75	16.26
Bra014400.1-P	Field mustard	golgi	30.84	15.42

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra018099	EnsemblPlants:Bra018099.1	EnsemblPlants:Bra018099.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4DNL2	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF524	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI000253F386	SEG:seg	:	:	:

Description

AT3G47940 (E=3e-139) | DNAJ heat shock protein, putative

Coordinates

chrA06:+:10236139..10237812

Molecular Weight (calculated)

37590.9 Da

IEP (calculated)

9.436

GRAVY (calculated)

-0.704

Length

334 amino acids

Sequence
(BLAST)

001: MGVDYYNILK VNHSATDDDL KKAYKRLAMI WHPDKNPSAR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKSGKI PNSSSYEASS SSSRPPHFFH
101: HHRQHPPNAA SFRFNPRDAE DIYAEIFGSE APGGHRTFRD GSFRNAHSSE LRKAPAVENP LPCSLEDLCK GVKKKMRLSR NVYDASGKMR VVEEILPIEI
201: KPGWKKGTKL TFPKKGNEEP GIIPADIIFV VEEKPHPLYK RDGNDLLVNQ EITLLEALTG KTLDLTTLDG KSLMIPLTDI INPEHEIVVP NEGMPISKEP
301: GKKGNLRLKL NVRYPSKLTA EQKSELKRVL GGVS

Best Arabidopsis Sequence Match ( AT3G47940.1 )
(BLAST)

001: MGVDYYNILK VNHNATEDDL KKAYKRLAMI WHPDKNPSTR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKSGKI PNSSSSEASS SSSSSSSRYP
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SU57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.