Factsheet for Bra029729.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
cytosol 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64940	Canola	nucleus	99.7	99.7
CDY27963	Canola	cytosol	97.56	97.26
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	92.68	91.02
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	89.02	89.57
AT3G08910.1	Thale cress	nucleus	87.5	88.85
KRG88624	Soybean	nucleus	81.71	79.53
Solyc09g005350.2.1	Tomato	nucleus, plastid	82.32	79.41
PGSC0003DMT400059397	Potato	cytosol	82.32	79.41
VIT_08s0105g00350.t01	Wine grape	cytosol	81.71	79.29
KRH65726	Soybean	nucleus	81.4	79.23
KRH75968	Soybean	nucleus	79.57	77.45
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	67.99	69.47
Bra031127.1-P	Field mustard	cytosol	69.21	67.16
Bra011031.1-P	Field mustard	cytosol	70.73	65.91
EES17644	Sorghum	cytosol	62.8	65.81
Zm00001d010958_P001	Maize	cytosol	64.63	65.03
TraesCS1A01G070300.1	Wheat	cytosol	61.59	59.59
Bra009848.1-P	Field mustard	cytosol	56.4	58.54
TraesCS1D01G072800.1	Wheat	nucleus	61.28	58.43
TraesCS1B01G088700.1	Wheat	cytosol	61.59	58.21
Bra020505.1-P	Field mustard	cytosol	57.01	56.16
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	57.93	55.88
Bra019519.1-P	Field mustard	cytosol	56.1	55.42
Bra033783.1-P	Field mustard	cytosol	54.88	55.38
Bra018099.1-P	Field mustard	cytosol	56.1	55.09
Bra018443.1-P	Field mustard	nucleus	57.01	53.58
HORVU1Hr1G015040.2	Barley	plastid	60.98	52.22
GSMUA_Achr6P15600_001	Banana	cytosol	68.29	50.68
Bra010365.1-P	Field mustard	mitochondrion	54.88	46.39
HORVU1Hr1G015060.2	Barley	plastid	32.93	37.89
Bra007687.1-P	Field mustard	golgi	36.28	34.39
Bra003501.1-P	Field mustard	nucleus	35.37	31.27
Bra036942.1-P	Field mustard	nucleus	30.49	28.65
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	31.4	28.45
Bra002385.1-P	Field mustard	nucleus	35.67	27.73
Bra002386.1-P	Field mustard	nucleus	35.37	27.49
Bra020169.1-P	Field mustard	nucleus	35.37	27.42
Bra006608.1-P	Field mustard	nucleus	33.23	26.72
Bra018413.1-P	Field mustard	nucleus	31.71	25.87
Bra019886.1-P	Field mustard	nucleus	32.32	24.48
Bra020721.1-P	Field mustard	mitochondrion	28.05	20.58
Bra030245.1-P	Field mustard	plastid	28.35	20.58
Bra037514.1-P	Field mustard	mitochondrion	27.74	20.13
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	25.91	18.56
Bra014400.1-P	Field mustard	golgi	36.59	17.96
Bra035201.1-P	Field mustard	plastid	27.44	17.96
Bra010892.1-P	Field mustard	mitochondrion	22.87	17.44
Bra011820.1-P	Field mustard	cytosol	28.05	17.39

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra029729	EnsemblPlants:Bra029729.1	EnsemblPlants:Bra029729.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4ELR0	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0002547CEC	SEG:seg	:	:	:

Description

AT3G08910 (E=1e-150) | DNAJ heat shock protein, putative

Coordinates

chrA05:+:22488078..22489873

Molecular Weight (calculated)

36421.2 Da

IEP (calculated)

9.777

GRAVY (calculated)

-0.684

Length

328 amino acids

Sequence
(BLAST)

001: MGVDYYKVLQ VDRNAKDEDL KKAYRKLAMK WHPDKNPNSK KEAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLNSQAPP PGAGGFPGGS NGGASFRFNG
101: RSADDIFSEF FGSSRPFGDS PFPFPEEVFS SYSRSAKGEA SNAAPPRKAA PIERQLPCSL EDLYKGTTKK MKISRDVIDS FGRPSTVEEI LTIEIKPGWK
201: KGTKITFPEK GNEQRGIIPS DLVFIVDEKP HAVFKRDGND LVITQKIPLV EALTGYTPQV TTLDGRTLTV PVNNVISPSY EEVVKGEGMP IPKDPSRKGN
301: LRIKFNIKFP SRLTTEQKTG IKRMFSSS

Best Arabidopsis Sequence Match ( AT3G08910.1 )
(BLAST)

001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS

Arabidopsis Description

At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.