Factsheet for PGSC0003DMT400032760

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105340.2.1	Tomato	plastid	77.3	97.45
TraesCS5A01G115000.1	Wheat	plastid	70.34	75.42
KRH31310	Soybean	nucleus, plastid	73.71	74.55
KRH59311	Soybean	plastid	72.36	74.36
KRG97564	Soybean	plastid	73.03	73.86
GSMUA_Achr1P15780_001	Banana	plastid	73.71	73.71
KRH43163	Soybean	plastid	71.91	73.23
GSMUA_Achr3P00920_001	Banana	mitochondrion	73.93	72.79
VIT_00s0324g00040.t01	Wine grape	plastid	78.43	72.56
AT2G22360.1	Thale cress	plastid	71.46	71.95
CDX89453	Canola	plastid	73.03	71.9
Os05t0334400-01	Rice	mitochondrion, plastid	72.13	71.81
Os05t0334000-01	Rice	mitochondrion, plastid	72.13	71.81
Os05t0333500-01	Rice	mitochondrion, plastid	72.13	71.81
Bra030245.1-P	Field mustard	plastid	72.81	71.68
CDY25588	Canola	plastid	73.03	71.59
EES13204	Sorghum	plastid	71.91	71.43
AT4G39960.1	Thale cress	mitochondrion, plastid	70.56	70.25
TraesCS5B01G115900.1	Wheat	plastid	70.79	65.22
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	72.13	64.85
Zm00001d024635_P001	Maize	mitochondrion	71.24	64.3
CDY63891	Canola	cytosol	69.21	63.37
Zm00001d047195_P001	Maize	mitochondrion	46.52	62.73
GSMUA_Achr4P20410_001	Banana	cytosol	73.71	62.48
CDX69371	Canola	mitochondrion	69.21	61.48
TraesCS5D01G125500.1	Wheat	nucleus	70.79	58.55
Bra011820.1-P	Field mustard	cytosol	68.99	58.03
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	70.79	54.03
PGSC0003DMT400064990	Potato	mitochondrion	33.48	33.63
PGSC0003DMT400036786	Potato	plastid	39.55	33.08
PGSC0003DMT400007444	Potato	cytosol	22.47	32.26
PGSC0003DMT400083824	Potato	cytosol	22.92	31.48
PGSC0003DMT400045398	Potato	mitochondrion	21.8	31.19
PGSC0003DMT400059397	Potato	cytosol	23.6	30.88
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	23.6	30.7
PGSC0003DMT400081223	Potato	cytosol	23.15	30.21
PGSC0003DMT400083040	Potato	cytosol	21.57	28.49
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	22.02	28.41
PGSC0003DMT400007728	Potato	nucleus	26.29	27.92
PGSC0003DMT400060145	Potato	cytosol	25.62	27.21
PGSC0003DMT400005019	Potato	cytosol	25.39	26.97
PGSC0003DMT400065401	Potato	nucleus	25.17	26.73
PGSC0003DMT400018083	Potato	nucleus	25.17	26.73
PGSC0003DMT400066980	Potato	nucleus	25.17	26.67
PGSC0003DMT400062759	Potato	cytosol	13.93	17.87
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	10.11	11.69

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:102605311	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M1AXZ6	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	EnsemblPlantsGene:PGSC0003DMG400012579
PGSC:PGSC0003DMG400012579	EnsemblPlants:PGSC0003DMT400032760	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43096	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349
UniParc:UPI0002960522	RefSeq:XP_006351767.1	RefSeq:XP_015166135.1	SEG:seg	:	:

Description

Chaperone protein DNAj [Source:PGSC_GENE;Acc:PGSC0003DMG400012579]

Coordinates

chr1:+:82009228..82015543

Molecular Weight (calculated)

47810.1 Da

IEP (calculated)

9.335

GRAVY (calculated)

-0.402

Length

445 amino acids

Sequence
(BLAST)

001: MAIIPCGSTW VARWGIQPQS VPKFPVTNIL SASPFCFSSK IRALASPNST LFCQESLQAL FSSVSNKNHY QRRGTSIVVR AEKDYYDVLG VSRNSSKSEI
101: KSSYRKLARS YHPDVNKEPG AEQKFKEISN AYEVLSDDEK RSIYDKYGEA GLKGAGAGMG DFSNAFDLFE SLFDGFGGMG GMGGMGGRGS RSRATEGEDQ
201: GYNLVLNFKE AVFGVEKEIE ISRLETCGTC DGSGAKPGTK PSTCNTCGGQ GQVVSSARTP LGVFQQVTTC SSCGGTGEIS TPCGTCNGDG RVRKSKRISL
301: KVPPGVDSGS RLRVRSEGNA GRRGGPPGDL FVMIEVLPDP VLKRDDTNIL YNCKVSYIDA ILGTTMKVPT VDGMVDLKIP AGTQPGTTLV MAKKGVPFLS
401: KPNMRGDQLV RVQVEIPKRL SSEERKLIEE LASLNKPKAA TNSKR

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.