Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
PGSC0003DMT400063187 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G44110.1 | PGSC0003DMT400063187 | AT3G48100.1 | 18642946 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc11g006460.1.1 | Tomato | nucleus | 98.81 | 98.81 |
PGSC0003DMT400060145 | Potato | cytosol | 92.12 | 92.12 |
VIT_13s0073g00560.t01 | Wine grape | cytosol | 89.74 | 90.38 |
VIT_06s0080g01230.t01 | Wine grape | cytosol | 89.5 | 89.93 |
PGSC0003DMT400065401 | Potato | nucleus | 89.5 | 89.5 |
KRH25334 | Soybean | nucleus | 88.54 | 88.97 |
KRG88903 | Soybean | nucleus | 88.07 | 88.49 |
KRH22611 | Soybean | nucleus | 85.92 | 86.33 |
KRH26709 | Soybean | nucleus | 84.73 | 85.13 |
Bra002385.1-P | Field mustard | nucleus | 84.73 | 84.12 |
CDX92386 | Canola | nucleus | 84.73 | 84.12 |
AT3G44110.1 | Thale cress | nucleus | 84.25 | 84.05 |
CDX92385 | Canola | nucleus | 84.49 | 83.89 |
Bra002386.1-P | Field mustard | nucleus | 84.25 | 83.65 |
CDY65546 | Canola | nucleus | 83.77 | 83.37 |
PGSC0003DMT400007728 | Potato | nucleus | 82.58 | 82.58 |
CDY09117 | Canola | nucleus | 83.05 | 82.27 |
Bra020169.1-P | Field mustard | nucleus | 82.82 | 82.03 |
AT5G22060.1 | Thale cress | cytosol | 81.38 | 81.38 |
Bra006608.1-P | Field mustard | nucleus | 76.13 | 78.19 |
CDX88812 | Canola | nucleus | 76.13 | 78.19 |
CDX70980 | Canola | nucleus | 74.22 | 76.41 |
PGSC0003DMT400066980 | Potato | nucleus | 74.94 | 74.76 |
CDY16617 | Canola | nucleus | 36.75 | 74.04 |
PGSC0003DMT400018083 | Potato | nucleus | 71.84 | 71.84 |
PGSC0003DMT400023249 | Potato | endoplasmic reticulum, golgi | 32.22 | 39.13 |
PGSC0003DMT400007444 | Potato | cytosol | 28.64 | 38.71 |
PGSC0003DMT400083824 | Potato | cytosol | 29.36 | 37.96 |
PGSC0003DMT400045398 | Potato | mitochondrion | 28.16 | 37.94 |
PGSC0003DMT400059397 | Potato | cytosol | 29.36 | 36.18 |
PGSC0003DMT400081223 | Potato | cytosol | 29.12 | 35.78 |
PGSC0003DMT400083040 | Potato | cytosol | 28.64 | 35.61 |
PGSC0003DMT400024267 | Potato | cytoskeleton, cytosol, nucleus | 28.64 | 35.09 |
PGSC0003DMT400032760 | Potato | plastid | 26.97 | 25.39 |
PGSC0003DMT400062759 | Potato | cytosol | 20.76 | 25.07 |
PGSC0003DMT400064990 | Potato | mitochondrion | 26.01 | 24.61 |
PGSC0003DMT400036786 | Potato | plastid | 26.97 | 21.24 |
PGSC0003DMT400045241 | Potato | extracellular, mitochondrion | 13.84 | 15.06 |
Protein Annotations
Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.10.230.10 | Gene3D:2.60.260.20 | InterPro:DnaJ | InterPro:DnaJ_C |
InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005524 | GO:GO:0006457 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
GO:GO:0009987 | GO:GO:0031072 | GO:GO:0046872 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:HSP_DnaJ_Cys-rich_dom |
InterPro:HSP_DnaJ_Cys-rich_dom_sf | InterPro:IPR001305 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | UniProt:M0ZPC7 |
HAMAP:MF_01152 | PFAM:PF00226 | PFAM:PF00684 | PFAM:PF01556 | EnsemblPlantsGene:PGSC0003DMG400001985 | PGSC:PGSC0003DMG400001985 |
EnsemblPlants:PGSC0003DMT400005019 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PFscan:PS51188 | PANTHER:PTHR43888 |
PANTHER:PTHR43888:SF4 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | SUPFAM:SSF57938 | UniParc:UPI0002954393 |
SEG:seg | : | : | : | : | : |
Description
DnaJ [Source:PGSC_GENE;Acc:PGSC0003DMG400001985]
Coordinates
chr11:+:6110705..6113937
Molecular Weight (calculated)
46622.4 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.798
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGRAPKKSD NTKYYEILGV PKAASQEDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE GMGGGGGGHD PFDIFQSFFG
101: GGGSPFGGGG SSRARRQRRG EDVIHPLKVS LEDLYNGTSK KLSLSRNVLC SKCKGKGSKS GASMKCSGCQ GSGMKVSIRQ LGPSMIQQMQ HPCNECKGTG
201: ETISDKDRCP QCKGEKVVQE KKVLEVHVEK GMQNGQKVTF PGEADEAPET ITGDIVFVLQ QKEHPKFKRK GDDLFVEHTL TLTEALCGFQ FVLTHLDNRQ
301: LLIKSQPGEV VKPDQFKAIN DEGMPMYQRP FMRGKMYIHF TVDFPESLTP EQCKNLEAVL PPRPKLQVSD MELDECEETT LHDVNIEDEM RRKQQAAQEA
401: YDEDDDMPGG AQRVQCAQQ
101: GGGSPFGGGG SSRARRQRRG EDVIHPLKVS LEDLYNGTSK KLSLSRNVLC SKCKGKGSKS GASMKCSGCQ GSGMKVSIRQ LGPSMIQQMQ HPCNECKGTG
201: ETISDKDRCP QCKGEKVVQE KKVLEVHVEK GMQNGQKVTF PGEADEAPET ITGDIVFVLQ QKEHPKFKRK GDDLFVEHTL TLTEALCGFQ FVLTHLDNRQ
301: LLIKSQPGEV VKPDQFKAIN DEGMPMYQRP FMRGKMYIHF TVDFPESLTP EQCKNLEAVL PPRPKLQVSD MELDECEETT LHDVNIEDEM RRKQQAAQEA
401: YDEDDDMPGG AQRVQCAQQ
001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ
Arabidopsis Description
ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.