Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88812 | Canola | nucleus | 95.33 | 95.1 |
| CDX92385 | Canola | nucleus | 87.22 | 84.12 |
| CDY09117 | Canola | nucleus | 86.98 | 83.69 |
| CDX92386 | Canola | nucleus | 86.49 | 83.41 |
| CDY65546 | Canola | nucleus | 86.24 | 83.37 |
| AT5G22060.1 | Thale cress | cytosol | 84.77 | 82.34 |
| CDY16617 | Canola | nucleus | 41.28 | 80.77 |
| KRH25334 | Soybean | nucleus | 78.62 | 76.74 |
| KRG88903 | Soybean | nucleus | 77.89 | 76.02 |
| VIT_06s0080g01230.t01 | Wine grape | cytosol | 76.66 | 74.82 |
| KRH22611 | Soybean | nucleus | 76.66 | 74.82 |
| PGSC0003DMT400060145 | Potato | cytosol | 76.9 | 74.7 |
| VIT_13s0073g00560.t01 | Wine grape | cytosol | 76.17 | 74.52 |
| Solyc05g055160.2.1 | Tomato | nucleus | 76.66 | 74.46 |
| PGSC0003DMT400005019 | Potato | cytosol | 76.41 | 74.22 |
| Solyc11g006460.1.1 | Tomato | nucleus | 76.41 | 74.22 |
| KRH26709 | Soybean | nucleus | 75.92 | 74.1 |
| EER93745 | Sorghum | nucleus | 76.17 | 73.99 |
| Zm00001d033210_P002 | Maize | nucleus | 76.17 | 73.99 |
| Os03t0648400-02 | Rice | nucleus | 75.68 | 73.86 |
| GSMUA_Achr4P31390_001 | Banana | cytosol | 75.43 | 73.8 |
| GSMUA_Achr6P29960_001 | Banana | nucleus | 74.94 | 73.67 |
| Os03t0787300-01 | Rice | plasma membrane | 75.43 | 73.62 |
| KXG37403 | Sorghum | cytosol | 75.43 | 73.44 |
| TraesCS5D01G382400.1 | Wheat | plastid | 75.92 | 73.4 |
| HORVU5Hr1G092610.3 | Barley | nucleus | 75.92 | 73.22 |
| Zm00001d034368_P001 | Maize | extracellular, plasma membrane | 75.18 | 73.21 |
| TraesCS5A01G372900.1 | Wheat | nucleus | 75.68 | 73.16 |
| TraesCS5B01G374900.1 | Wheat | nucleus | 75.68 | 73.16 |
| Zm00001d013111_P001 | Maize | extracellular, plasma membrane | 74.94 | 73.14 |
| GSMUA_Achr9P25940_001 | Banana | nucleus | 74.94 | 73.14 |
| Solyc04g009770.2.1 | Tomato | nucleus | 74.94 | 72.97 |
| PGSC0003DMT400065401 | Potato | nucleus | 74.69 | 72.55 |
| GSMUA_Achr4P22790_001 | Banana | cytosol | 74.45 | 72.49 |
| PGSC0003DMT400007728 | Potato | nucleus | 74.2 | 72.08 |
| Solyc11g071830.1.1 | Tomato | plastid | 73.71 | 71.77 |
| Zm00001d031357_P001 | Maize | cytosol, nucleus, plastid | 31.7 | 70.11 |
| GSMUA_Achr7P01290_001 | Banana | nucleus | 71.74 | 70.02 |
| Zm00001d048538_P001 | Maize | nucleus | 55.04 | 68.92 |
| Zm00001d013669_P002 | Maize | cytosol | 75.68 | 68.6 |
| Zm00001d006666_P001 | Maize | nucleus | 47.91 | 66.55 |
| Zm00001d006230_P001 | Maize | cytosol | 47.42 | 66.55 |
| Zm00001d045645_P001 | Maize | cytosol | 42.75 | 65.41 |
| Zm00001d006563_P001 | Maize | mitochondrion | 42.26 | 63.24 |
| Zm00001d004840_P001 | Maize | mitochondrion | 48.4 | 57.43 |
| Zm00001d026185_P001 | Maize | endoplasmic reticulum | 68.55 | 55.47 |
| CDX97443 | Canola | cytosol | 27.27 | 36.88 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 28.5 | 36.48 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 28.5 | 36.14 |
| CDY35188 | Canola | cytosol | 28.26 | 35.49 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 28.26 | 35.17 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 29.98 | 35.16 |
| CDY20944 | Canola | cytosol | 26.29 | 35.08 |
| CDX76646 | Canola | golgi | 29.73 | 34.97 |
| CDY11430 | Canola | golgi | 29.73 | 34.97 |
| CDX89142 | Canola | endoplasmic reticulum | 29.73 | 34.87 |
| CDY37986 | Canola | cytosol | 20.15 | 34.75 |
| CDY63310 | Canola | endoplasmic reticulum | 29.48 | 34.58 |
| CDY36915 | Canola | cytosol | 28.26 | 34.43 |
| CDX83026 | Canola | cytosol | 27.52 | 34.15 |
| CDX80523 | Canola | cytosol | 26.54 | 33.64 |
| CDX88188 | Canola | cytosol | 26.54 | 33.64 |
| CDY65077 | Canola | cytosol | 27.76 | 33.63 |
| CDY38388 | Canola | cytosol | 28.26 | 33.63 |
| CDY58657 | Canola | cytosol | 26.78 | 33.44 |
| CDY21803 | Canola | nucleus | 27.76 | 33.43 |
| CDY13869 | Canola | cytosol | 27.76 | 33.43 |
| CDY05498 | Canola | cytosol | 27.27 | 33.33 |
| CDY54902 | Canola | cytosol | 27.27 | 33.33 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 27.52 | 33.23 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 27.03 | 33.23 |
| CDY20637 | Canola | cytosol | 26.04 | 33.12 |
| CDX68447 | Canola | cytosol | 27.76 | 32.94 |
| CDY07893 | Canola | cytosol | 26.04 | 32.82 |
| CDY64940 | Canola | nucleus | 26.29 | 32.62 |
| CDY22173 | Canola | cytosol | 26.78 | 32.44 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 26.54 | 32.34 |
| CDY27963 | Canola | cytosol | 26.04 | 32.22 |
| CDY24146 | Canola | cytosol | 28.26 | 30.5 |
| CDY54516 | Canola | mitochondrion | 25.8 | 23.18 |
| CDX86330 | Canola | mitochondrion | 25.8 | 23.03 |
| CDY45921 | Canola | mitochondrion | 24.57 | 22.37 |
| CDY35761 | Canola | mitochondrion | 24.57 | 22.37 |
| CDX89453 | Canola | plastid | 24.32 | 21.9 |
| CDY25588 | Canola | plastid | 24.32 | 21.81 |
| CDX90134 | Canola | mitochondrion | 22.36 | 21.16 |
| CDY58774 | Canola | plastid | 25.55 | 20.8 |
| CDX87288 | Canola | plastid | 25.55 | 20.76 |
| CDY63891 | Canola | cytosol | 24.32 | 20.37 |
| CDX92166 | Canola | plastid | 25.06 | 20.2 |
| CDX95817 | Canola | plastid | 24.82 | 20.08 |
| CDX69371 | Canola | mitochondrion | 24.32 | 19.76 |
| CDY66166 | Canola | plastid | 16.46 | 19.25 |
| CDY14974 | Canola | nucleus | 16.22 | 19.08 |
| CDY35719 | Canola | mitochondrion | 22.11 | 18.11 |
| CDY20977 | Canola | nucleus | 16.22 | 16.38 |
| CDY20589 | Canola | nucleus | 15.48 | 16.03 |
| CDX97927 | Canola | nucleus | 16.71 | 15.7 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 16.71 | 15.63 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.10.230.10 | Gene3D:2.60.260.20 | GO:A0A078C299 | EnsemblPlants:CDX70980 |
| ProteinID:CDX70980 | ProteinID:CDX70980.1 | InterPro:DnaJ | InterPro:DnaJ_C | InterPro:DnaJ_domain | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006457 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0031072 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00140905001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:HSP_DnaJ_Cys-rich_dom | InterPro:HSP_DnaJ_Cys-rich_dom_sf | InterPro:IPR001305 | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | HAMAP:MF_01152 | PFAM:PF00226 | PFAM:PF00684 | PFAM:PF01556 |
| PRINTS:PR00625 | PFscan:PS50076 | PFscan:PS51188 | PANTHER:PTHR43888 | PANTHER:PTHR43888:SF4 | SMART:SM00271 |
| SUPFAM:SSF46565 | SUPFAM:SSF49493 | SUPFAM:SSF57938 | UniParc:UPI0004EEA1A9 | SEG:seg | : |
Description
BnaC03g10640D
Coordinates
chrLK031791:-:3014464..3016483
Molecular Weight (calculated)
45331.8 Da
IEP (calculated)
6.730
GRAVY (calculated)
-0.749
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRGPSSKS DNTKFYEILG VPKSASPEDL KKAYKRAAIK NHPDKGGDPE KFKELGEAYG VLSDPEKREI YDQYGEEGIK DGIDRHDPFD IFSSFFGRNE
101: RRQRRGEDVV HPLRVSLEDL YLGTTKKLSL SRNALCSKCS GKGSKSGASL KCGGCQGKGM KVSIRQIGPG MIQQMQHVCQ DCKGTGETIN DRDRCPQCKG
201: DKVIPEKKVL DVAVEKGMQN SQKITFRGQA DEAPDTVTGD IVLVIQQKEH PKFKRKGNDL FVEHTLSLTE ALCGFQFVLT HLDARQLLIK SIPGEVVQPD
301: SYKAISDEGM PMHQRPFMKG KLYIHFTVEF PESLSGDQTK AFEAVLPKPA ESALSDMEID KCEETTLHEV NIEAEMKRKA QAKREAYDDD DEEEGPGGGH
401: GVQCAQQ
101: RRQRRGEDVV HPLRVSLEDL YLGTTKKLSL SRNALCSKCS GKGSKSGASL KCGGCQGKGM KVSIRQIGPG MIQQMQHVCQ DCKGTGETIN DRDRCPQCKG
201: DKVIPEKKVL DVAVEKGMQN SQKITFRGQA DEAPDTVTGD IVLVIQQKEH PKFKRKGNDL FVEHTLSLTE ALCGFQFVLT HLDARQLLIK SIPGEVVQPD
301: SYKAISDEGM PMHQRPFMKG KLYIHFTVEF PESLSGDQTK AFEAVLPKPA ESALSDMEID KCEETTLHEV NIEAEMKRKA QAKREAYDDD DEEEGPGGGH
401: GVQCAQQ
001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ
Arabidopsis Description
ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.