Factsheet for HORVU5Hr1G092610.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G382400.1	Wheat	plastid	98.82	99.05
TraesCS5B01G374900.1	Wheat	nucleus	98.58	98.81
TraesCS5A01G372900.1	Wheat	nucleus	98.58	98.81
HORVU5Hr1G103680.1	Barley	cytosol	83.41	83.61
AT3G44110.1	Thale cress	nucleus	81.75	82.14
AT5G22060.1	Thale cress	cytosol	81.28	81.86
CDY09117	Canola	nucleus	81.99	81.8
Bra002385.1-P	Field mustard	nucleus	81.75	81.75
CDX92386	Canola	nucleus	81.75	81.75
CDX92385	Canola	nucleus	81.52	81.52
Bra020169.1-P	Field mustard	nucleus	81.52	81.32
Bra002386.1-P	Field mustard	nucleus	81.28	81.28
CDY65546	Canola	nucleus	80.81	81.0
CDX88812	Canola	nucleus	74.64	77.21
Bra006608.1-P	Field mustard	nucleus	74.64	77.21
CDY16617	Canola	nucleus	37.68	76.44
CDX70980	Canola	nucleus	73.22	75.92
HORVU6Hr1G065410.3	Barley	cytosol, mitochondrion	48.58	70.21
HORVU0Hr1G016360.1	Barley	cytosol	29.38	70.06
HORVU0Hr1G018300.1	Barley	plastid	73.93	64.46
HORVU7Hr1G070170.1	Barley	cytosol	28.2	34.39
HORVU1Hr1G087070.1	Barley	cytosol	29.38	33.6
HORVU1Hr1G022990.1	Barley	cytosol	32.7	32.47
HORVU6Hr1G016170.1	Barley	cytosol	25.12	31.45
HORVU6Hr1G016080.3	Barley	cytosol	25.12	30.99
HORVU1Hr1G015040.2	Barley	plastid	27.25	30.03
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	29.86	29.3
HORVU1Hr1G015060.2	Barley	plastid	16.59	24.56
HORVU3Hr1G113710.2	Barley	plastid	19.67	24.48
HORVU3Hr1G081940.1	Barley	cytosol	18.72	24.38
HORVU0Hr1G017450.8	Barley	cytosol	27.01	23.55
HORVU5Hr1G036400.3	Barley	plastid	23.22	22.95
HORVU7Hr1G009230.8	Barley	plastid	24.17	22.92
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	27.25	19.73
HORVU4Hr1G066920.5	Barley	mitochondrion	25.59	19.01
HORVU0Hr1G000620.4	Barley	plastid	14.46	15.44
HORVU7Hr1G073040.2	Barley	cytosol	8.29	15.09

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A287S8X8	ncoils:Coil
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
EnsemblPlantsGene:HORVU5Hr1G092610	EnsemblPlants:HORVU5Hr1G092610.3	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43888
PANTHER:PTHR43888:SF4	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000B463944
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:588900232..588903928

Molecular Weight (calculated)

46425.0 Da

IEP (calculated)

6.442

GRAVY (calculated)

-0.749

Length

422 amino acids

Sequence
(BLAST)

001: MFGRAPKKSD NTKYYEVLGV PKDAAQDDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DKYGEDALKE GMGGGGGGGV DPFDIFSSFF
101: GPSFGGGGGG SSRGRRQRRG EDVVHPLKAS LEDLYNGTSK KLSLSRSVLC SKCKGKGSKS GASMRCPGCQ GSGMKVTIRQ LGPSMIQQVQ HACNDCKGTG
201: ESINDKDRCP GCKGEKVLQE KKVLEVHVEK GMQHNQKITF PGEADEAPDT VTGDIVFVVQ QKEHPKFKRK GDDLFYEHTI SLTEALCGFQ LVLTHLDNRQ
301: LLIKSNPGEV VKPDSFKAIS DEGMPMYQRP FMKGKLYIHF TVEFPDSLAP DQCKALEAVL PPKPASKLTD MELDECEETT MHDVNMEEEM RRKAHAAAQE
401: AYDEDDDEMP GGGAQRVQCA QQ

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.