Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G022990.1 | |
| HORVU7Hr1G079030.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G62600.1 | HORVU7Hr1G079030.2 | AT2G25110.1 | 19763086 |
| AT3G62600.1 | HORVU1Hr1G022990.1 | AT3G62600.1 | 19763086 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G099300.1 | Wheat | nucleus | 76.47 | 92.86 |
| TraesCS1D01G107200.1 | Wheat | nucleus | 76.47 | 92.86 |
| TraesCS1B01G125100.1 | Wheat | nucleus | 76.24 | 92.57 |
| Os05t0156500-01 | Rice | cytosol, nucleus | 30.82 | 89.73 |
| EES17752 | Sorghum | endoplasmic reticulum, golgi | 70.82 | 86.0 |
| Zm00001d009783_P004 | Maize | mitochondrion | 69.65 | 84.57 |
| Zm00001d037586_P001 | Maize | endoplasmic reticulum | 69.18 | 80.11 |
| VIT_07s0005g01220.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 62.12 | 76.52 |
| GSMUA_Achr8P33890_001 | Banana | endoplasmic reticulum | 61.65 | 76.16 |
| Solyc01g079610.2.1 | Tomato | nucleus | 61.18 | 75.36 |
| PGSC0003DMT400023249 | Potato | endoplasmic reticulum, golgi | 60.94 | 75.07 |
| KRG96505 | Soybean | nucleus | 60.24 | 74.64 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 60.71 | 74.57 |
| KRH68242 | Soybean | endoplasmic reticulum | 60.0 | 74.34 |
| CDY63310 | Canola | endoplasmic reticulum | 60.47 | 74.06 |
| CDX89142 | Canola | endoplasmic reticulum | 60.47 | 74.06 |
| CDY11430 | Canola | golgi | 59.76 | 73.41 |
| CDX76646 | Canola | golgi | 59.76 | 73.41 |
| Bra007687.1-P | Field mustard | golgi | 59.76 | 73.41 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 59.76 | 73.2 |
| KRH69236 | Soybean | endoplasmic reticulum | 59.29 | 72.83 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 55.06 | 71.56 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 60.94 | 69.44 |
| KRH55068 | Soybean | cytosol | 21.41 | 66.42 |
| Bra003501.1-P | Field mustard | nucleus | 56.71 | 64.96 |
| Bra014400.1-P | Field mustard | golgi | 60.47 | 38.47 |
| HORVU5Hr1G092610.3 | Barley | nucleus | 32.47 | 32.7 |
| HORVU1Hr1G087070.1 | Barley | cytosol | 28.24 | 32.52 |
| HORVU5Hr1G103680.1 | Barley | cytosol | 31.53 | 31.83 |
| HORVU7Hr1G070170.1 | Barley | cytosol | 25.88 | 31.79 |
| HORVU6Hr1G016170.1 | Barley | cytosol | 23.76 | 29.97 |
| HORVU1Hr1G015040.2 | Barley | plastid | 26.35 | 29.24 |
| HORVU6Hr1G016080.3 | Barley | cytosol | 23.53 | 29.24 |
| HORVU3Hr1G032480.1 | Barley | cytosol, nucleus | 28.0 | 27.67 |
| HORVU0Hr1G018300.1 | Barley | plastid | 29.88 | 26.24 |
| HORVU6Hr1G065410.3 | Barley | cytosol, mitochondrion | 17.18 | 25.0 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 17.41 | 22.84 |
| HORVU1Hr1G015060.2 | Barley | plastid | 15.29 | 22.81 |
| HORVU5Hr1G036400.3 | Barley | plastid | 22.82 | 22.72 |
| HORVU3Hr1G113710.2 | Barley | plastid | 17.88 | 22.42 |
| HORVU0Hr1G016360.1 | Barley | cytosol | 9.18 | 22.03 |
| HORVU7Hr1G009230.8 | Barley | plastid | 22.35 | 21.35 |
| HORVU0Hr1G017450.8 | Barley | cytosol | 21.88 | 19.21 |
| HORVU5Hr1G037600.2 | Barley | cytosol, nucleus | 22.35 | 16.3 |
| HORVU4Hr1G066920.5 | Barley | mitochondrion | 21.18 | 15.85 |
| HORVU0Hr1G000620.4 | Barley | plastid | 14.59 | 15.7 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 8.47 | 15.52 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.1.2.1.2 | Gene3D:2.60.260.20 | UniProt:A0A287EWW0 | ncoils:Coil | InterPro:DnaJ_C |
| InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | EnsemblPlantsGene:HORVU1Hr1G022990 | EnsemblPlants:HORVU1Hr1G022990.1 | InterPro:HSP40/DnaJ_pept-bd |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF01556 | PRINTS:PR00625 |
| ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR43888 | PANTHER:PTHR43888:SF14 | SMART:SM00271 | SUPFAM:SSF46565 |
| SUPFAM:SSF49493 | UniParc:UPI000B471002 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:100042603..100068885
Molecular Weight (calculated)
38901.2 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.644
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEMFQEL EFIFQKNARI
101: ERKSFYDVLQ VPKGASEDQI KRSYRKLALK YHPDKNPDNE EATKRFAEIN NAYEVLTDQE KRKVYDRYGE EGLKQFQGGR GGGGGGMNMQ DIFSSFFGGG
201: GGGMEEEEEQ IIKGDDVIVE LDASLEDLYM GGSLKVWREK NIIKPAPGKR RCNCRNEVYH RQIGPGMYQQ MTEQVCDQCP NVKYVREGDF LTVDIEKGMQ
301: DGQEVSFFEE GEPKIDGEPG DLKFRIRTAP HDRFRREGND LHATVTISLL QALVGFEKNL KHLDNHLVQI GSQGVTKPKE VRKFKGEGMP LHQSNKKGDL
401: YVTFEVLFPK TLTDDQKAKL KDVLA
101: ERKSFYDVLQ VPKGASEDQI KRSYRKLALK YHPDKNPDNE EATKRFAEIN NAYEVLTDQE KRKVYDRYGE EGLKQFQGGR GGGGGGMNMQ DIFSSFFGGG
201: GGGMEEEEEQ IIKGDDVIVE LDASLEDLYM GGSLKVWREK NIIKPAPGKR RCNCRNEVYH RQIGPGMYQQ MTEQVCDQCP NVKYVREGDF LTVDIEKGMQ
301: DGQEVSFFEE GEPKIDGEPG DLKFRIRTAP HDRFRREGND LHATVTISLL QALVGFEKNL KHLDNHLVQI GSQGVTKPKE VRKFKGEGMP LHQSNKKGDL
401: YVTFEVLFPK TLTDDQKAKL KDVLA
001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
Arabidopsis Description
ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.