Factsheet for HORVU7Hr1G079030.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G022990.1
HORVU7Hr1G079030.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25110.1	HORVU7Hr1G079030.2	AT2G25110.1	19763086
AT2G25110.1	HORVU1Hr1G022990.1	AT3G62600.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G231000.1	Wheat	endoplasmic reticulum	55.04	74.74
TraesCS7A01G330300.1	Wheat	endoplasmic reticulum	56.2	66.82
TraesCS7D01G327100.1	Wheat	endoplasmic reticulum	55.43	65.9
Os08t0278900-01	Rice	endoplasmic reticulum	51.16	60.83
EES13770	Sorghum	endoplasmic reticulum, golgi, vacuole	50.39	59.91
GSMUA_Achr3P13410_001	Banana	endoplasmic reticulum, golgi, vacuole	42.25	50.46
KRH61684	Soybean	endoplasmic reticulum	42.64	49.55
VIT_04s0008g05820.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	41.47	49.54
KRH52351	Soybean	endoplasmic reticulum	41.47	49.08
VIT_09s0070g00030.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	39.53	47.66
CDY35374	Canola	endoplasmic reticulum, extracellular, golgi	38.76	45.87
Bra032038.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	38.76	45.87
AT2G25110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	38.37	45.41
PGSC0003DMT400036615	Potato	endoplasmic reticulum, extracellular, golgi	37.21	45.28
CDY55710	Canola	endoplasmic reticulum, extracellular, golgi	37.98	44.95
CDX76770	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.21	43.64
CDY56283	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.21	43.44
Bra007818.1-P	Field mustard	endoplasmic reticulum, plasma membrane	36.43	42.92
GSMUA_Achr6P04030_001	Banana	cytosol	18.99	41.88
Solyc03g117020.2.1	Tomato	nucleus	46.9	32.79
GSMUA_Achr3P00940_001	Banana	cytosol	5.43	17.72

Protein Annotations

EnsemblPlants:HORVU7Hr1G079030.2	EnsemblPlantsGene:HORVU7Hr1G079030	Gene3D:2.80.10.50	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:GlyclTrfase_39-like	InterPro:IPR016093	InterPro:MIR_dom_sf	InterPro:MIR_motif	PANTHER:PTHR10050	PANTHER:PTHR10050:SF46
PFAM:PF02815	PFscan:PS50919	SEG:seg	SMART:SM00472	SUPFAM:SSF82109	TMHMM:TMhelix
UniParc:UPI000B472442	UniProt:A0A287X109	MapMan:19.1.1.2.1.3	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:465025238..465036116

Molecular Weight (calculated)

28138.9 Da

IEP (calculated)

7.324

GRAVY (calculated)

-0.451

Length

258 amino acids

Sequence
(BLAST)

001: VNEKQALTNT NAAQFACSLQ PESSPRRTGE PSGSFPSLSR RHAAVAPPTP QAPVLSRRKT ASAEAKPSEA ATTSLAGALA RERIRRRGER EEEEEAAPFW
101: QRTWFLALLL GMAAASFALA LLLYLGLDLP EASPSQSYAA DLDTAVEISY GSVIKLMHER TKFRLHSHDV PYGSGSGQQS VTSFPNVDDA NSYWIVRPQP
201: DTSAKQGHAI TPGTIVRLQH MRTRKWLHSH LHASPITGNL EVSCFGGEGE SDTGDYWM

Best Arabidopsis Sequence Match ( AT2G25110.1 )
(BLAST)

001: MALGFFCLAI FLYLSLDPDS GYTSASAAAS GKEGVEITYG SAIKLMHEKT KFRLHSHDVP YGSGSGQQSV TGFPGVVDSN SYWIVKPVPG TTEKQGDAVK
101: SGATIRLQHM KTRKWLHSHL HASPISGNLE VSCFGDDTNS DTGDHWKLII EGSGKTWKQD QRVRLQHIDT SGYLHSHDKK YQRIAGGQQE VCGIREKKAD
201: NIWLAAEGVY LPLNESSK

Arabidopsis Description

SDF2Stromal cell-derived factor 2-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE8]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.