Factsheet for GSMUA_Achr11P13990_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
mitochondrion 2
golgi 1
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr3P00940_001
GSMUA_Achr3P13410_001
GSMUA_Achr3P27250_001
GSMUA_Achr4P11940_001
GSMUA_Achr5P10770_001
GSMUA_Achr6P04010_001
GSMUA_Achr6P04030_001
GSMUA_Achr8P33890_001
GSMUA_Achr9P23710_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62600.1	GSMUA_Achr3P00940_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr3P13410_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr6P04010_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr6P04030_001	AT2G25110.1	19763086
AT3G62600.1	GSMUA_Achr11P...	AT3G62600.1	19763086
AT3G62600.1	GSMUA_Achr8P33890_001	AT3G62600.1	19763086
AT3G62600.1	GSMUA_Achr3P27250_001	AT5G28540.1	19763086
AT3G62600.1	GSMUA_Achr4P11940_001	AT5G28540.1	19763086
AT3G62600.1	GSMUA_Achr5P10770_001	AT5G28540.1	19763086
AT3G62600.1	GSMUA_Achr9P23710_001	AT5G28540.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	80.43	87.21
Os05t0156500-01	Rice	cytosol, nucleus	32.98	84.25
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	75.34	81.45
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	72.92	78.84
Solyc01g079610.2.1	Tomato	nucleus	72.65	78.55
EES17752	Sorghum	endoplasmic reticulum, golgi	72.12	76.86
TraesCS1B01G125100.1	Wheat	nucleus	71.85	76.57
TraesCS1D01G107200.1	Wheat	nucleus	71.85	76.57
TraesCS1A01G099300.1	Wheat	nucleus	71.58	76.29
Zm00001d009783_P004	Maize	mitochondrion	71.31	76.0
CDY11430	Canola	golgi	69.97	75.43
CDX76646	Canola	golgi	69.97	75.43
Bra007687.1-P	Field mustard	golgi	69.97	75.43
CDY63310	Canola	endoplasmic reticulum	69.71	74.93
CDX89142	Canola	endoplasmic reticulum	69.71	74.93
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	69.44	74.86
CDY59898	Canola	endoplasmic reticulum, golgi	68.63	73.78
CDX67894	Canola	endoplasmic reticulum, golgi	63.54	72.48
Zm00001d037586_P001	Maize	endoplasmic reticulum	70.78	71.93
KXG32445	Sorghum	endoplasmic reticulum	64.61	69.65
KRH55068	Soybean	cytosol	25.47	69.34
Bra003501.1-P	Field mustard	nucleus	67.02	67.39
HORVU1Hr1G022990.1	Barley	cytosol	69.44	60.94
Zm00001d009210_P001	Maize	endoplasmic reticulum	57.64	52.96
Bra014400.1-P	Field mustard	golgi	69.44	38.77
GSMUA_AchrUn_...	Banana	cytosol	29.49	36.79
GSMUA_AchrUn_...	Banana	cytosol	14.48	36.0
GSMUA_Achr3P15480_001	Banana	cytosol	28.15	35.96
GSMUA_Achr8P16030_001	Banana	cytosol	30.83	34.74
GSMUA_Achr4P12330_001	Banana	nucleus	28.42	32.32
GSMUA_Achr2P19740_001	Banana	cytosol	27.08	31.37
GSMUA_Achr11P...	Banana	cytosol	31.9	31.23
GSMUA_Achr9P25940_001	Banana	nucleus	34.85	31.18
GSMUA_Achr6P29960_001	Banana	nucleus	34.58	31.16
GSMUA_Achr4P22790_001	Banana	cytosol	34.85	31.1
GSMUA_Achr6P13820_001	Banana	cytosol	14.21	30.99
GSMUA_Achr4P31390_001	Banana	cytosol	34.32	30.77
GSMUA_Achr8P11020_001	Banana	nucleus	32.71	30.5
GSMUA_Achr7P01290_001	Banana	nucleus	33.78	30.22
GSMUA_AchrUn_...	Banana	cytosol	26.01	30.03
GSMUA_Achr1P01630_001	Banana	cytosol	18.5	29.11
GSMUA_Achr9P23300_001	Banana	cytosol	26.27	28.49
GSMUA_Achr11P...	Banana	cytosol	28.42	28.34
GSMUA_Achr6P15600_001	Banana	cytosol	29.22	24.66
GSMUA_Achr7P03030_001	Banana	cytosol	20.38	23.9
GSMUA_Achr1P15780_001	Banana	plastid	27.88	23.37
GSMUA_Achr3P00920_001	Banana	mitochondrion	27.61	22.79
GSMUA_Achr4P11580_001	Banana	mitochondrion	26.27	21.68
GSMUA_Achr3P00410_001	Banana	mitochondrion	25.74	21.33
GSMUA_Achr11P...	Banana	plastid	26.01	19.8
GSMUA_Achr4P20410_001	Banana	cytosol	27.61	19.62
GSMUA_Achr4P12400_001	Banana	mitochondrion	24.13	19.23
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	24.93	17.06
GSMUA_Achr6P02160_001	Banana	mitochondrion	20.91	16.49
GSMUA_Achr8P32540_001	Banana	mitochondrion	10.46	14.03

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.1.2.1.2	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr11G13990_001	EnsemblPlants:GSMUA_Achr11P13990_001	EnsemblPlants:GSMUA_Achr11T13990_001	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0RS29	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR43888	PANTHER:PTHR43888:SF14	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000295AA36	SEG:seg	:	:

Description

Putative DnaJ homolog subfamily B member 11 [Source:GMGC_GENE;Acc:GSMUA_Achr11G13990_001]

Coordinates

chr11:+:15077320..15082291

Molecular Weight (calculated)

42414.5 Da

IEP (calculated)

6.593

GRAVY (calculated)

-0.689

Length

373 amino acids

Sequence
(BLAST)

001: MWRKRSGKES RSHAEVDDPM LIAGASDPMA PSVRRGLLLF VFLLSHVLCV LGGKSYYDVL QVSKGASDEQ IKRAYRKLAL KYHPDKNQGN EEANKRFAEI
101: NNAYEVLSDS EKRNIYDRYG EEGLKQHAAG GGRGPGMNIQ DIFNEFFGTG HQEDQEESIP KGDDVIIELD ATLEDLYMGG SLKVWREKNV IKPAPGKRRC
201: NCRNEVYHRQ IAPGMFQQMT EQVCEQCPNV KYEREGYFIT VDIEKGMQDG QDVLFYEDGE PKIDGEAGDL KFRIRTAPHE RFRREGNDLH TTVTISLLQA
301: LVGFEKTIEH LDEHPLEIGT KGITKPKEVR KFKGEGMPLH LSTKRGDLYV TFEVLFPKSL TEDQKNKIKS VLS

Best Arabidopsis Sequence Match ( AT3G62600.1 )
(BLAST)

001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Arabidopsis Description

ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.