Factsheet for Zm00001d009210_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d009210_P001
Zm00001d009783_P004
Zm00001d014993_P001
Zm00001d032157_P001
Zm00001d037586_P001
Zm00001d050430_P003
Zm00001d054043_P007

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62600.1	Zm00001d032157_P001	AT2G25110.1	19763086
AT3G62600.1	Zm00001d050430_P003	AT2G25110.1	19763086
AT3G62600.1	Zm00001d009210_P001	AT3G62600.1	19763086
AT3G62600.1	Zm00001d009783_P004	AT3G62600.1	19763086
AT3G62600.1	Zm00001d037586_P001	AT3G62600.1	19763086
AT3G62600.1	Zm00001d014993_P001	AT5G28540.1	19763086
AT3G62600.1	Zm00001d054043_P007	AT5G28540.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32445	Sorghum	endoplasmic reticulum	63.79	74.86
Os05t0156500-01	Rice	cytosol, nucleus	26.85	74.66
Zm00001d009783_P004	Maize	mitochondrion	53.45	62.0
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	52.22	61.63
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	51.97	61.16
KRH68242	Soybean	endoplasmic reticulum	50.99	60.35
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	51.23	60.12
KRG96505	Soybean	nucleus	50.74	60.06
KRH69236	Soybean	endoplasmic reticulum	50.99	59.83
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	50.74	59.71
Zm00001d037586_P001	Maize	endoplasmic reticulum	53.94	59.67
CDY63310	Canola	endoplasmic reticulum	50.74	59.37
CDX89142	Canola	endoplasmic reticulum	50.74	59.37
Solyc01g079610.2.1	Tomato	nucleus	50.25	59.13
CDY11430	Canola	golgi	49.75	58.38
CDX76646	Canola	golgi	49.75	58.38
Bra007687.1-P	Field mustard	golgi	49.75	58.38
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	52.96	57.64
CDY59898	Canola	endoplasmic reticulum, golgi	48.77	57.06
KRH55068	Soybean	cytosol	18.97	56.2
CDX67894	Canola	endoplasmic reticulum, golgi	44.83	55.66
Bra003501.1-P	Field mustard	nucleus	47.04	51.48
Zm00001d010958_P001	Maize	cytosol	25.37	31.6
Bra014400.1-P	Field mustard	golgi	49.51	30.09
Zm00001d032347_P001	Maize	cytosol	24.63	29.33
Zm00001d039000_P001	Maize	mitochondrion	25.86	29.01
Zm00001d016440_P001	Maize	cytosol	24.63	28.9
Zm00001d009027_P001	Maize	cytosol	23.65	28.57
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	24.63	28.49
Zm00001d033210_P002	Maize	nucleus	28.08	27.21
Zm00001d034368_P001	Maize	extracellular, plasma membrane	27.83	27.03
Zm00001d013111_P001	Maize	extracellular, plasma membrane	27.59	26.86
Zm00001d024527_P001	Maize	cytosol	22.91	26.72
Zm00001d013669_P002	Maize	cytosol	28.57	25.84
Zm00001d012242_P001	Maize	cytosol	19.46	25.0
Zm00001d017476_P001	Maize	plasma membrane	25.37	24.41
Zm00001d048538_P001	Maize	nucleus	19.46	24.31
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	10.34	22.83
Zm00001d038250_P001	Maize	cytosol	18.47	22.39
Zm00001d039259_P001	Maize	nucleus	23.65	22.27
Zm00001d006563_P001	Maize	mitochondrion	14.29	21.32
Zm00001d006666_P001	Maize	nucleus	15.27	21.16
Zm00001d026185_P001	Maize	endoplasmic reticulum	26.11	21.07
Zm00001d035975_P001	Maize	mitochondrion	22.17	20.98
Zm00001d023537_P002	Maize	mitochondrion	21.92	20.94
Zm00001d035974_P001	Maize	mitochondrion	21.92	20.75
Zm00001d006230_P001	Maize	cytosol	14.78	20.69
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	21.43	20.52
Zm00001d045645_P001	Maize	cytosol	13.05	19.92
Zm00001d004840_P001	Maize	mitochondrion	16.5	19.53
Zm00001d042653_P001	Maize	plastid	18.23	18.5
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	21.43	17.58
Zm00001d024635_P001	Maize	mitochondrion	21.18	17.44
Zm00001d018413_P003	Maize	mitochondrion	22.41	15.99
Zm00001d028256_P002	Maize	plastid	20.94	15.8
Zm00001d044878_P002	Maize	mitochondrion	18.97	15.71
Zm00001d052001_P002	Maize	plastid	23.4	15.47
Zm00001d047195_P001	Maize	mitochondrion	11.58	14.24

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.1.2.1.2	Gene3D:2.60.260.20	UniProt:A0A1D6FI63	ProteinID:AQK91491.1	InterPro:DnaJ_C
InterPro:DnaJ_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR43888	PANTHER:PTHR43888:SF14
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SignalP:SignalP-noTM	UniParc:UPI0008458F0A	EnsemblPlantsGene:Zm00001d009210
EnsemblPlants:Zm00001d009210_P001	EnsemblPlants:Zm00001d009210_T001	SEG:seg	:	:	:

Description

DnaJ protein ERDJ3B

Coordinates

chr8:+:43203651..43206985

Molecular Weight (calculated)

46192.2 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.511

Length

406 amino acids

Sequence
(BLAST)

001: MAARRVALLF AILLLHQTVS SLAGKSYYEI LQVPKGASEE QIKRAYRKLA LKYHPDKNPN NEEAGRRFAE INDAYEVLTD RKKRKADDWH GEEDLAKYMG
101: RAMKVDVEYV FSNGGSPKQE EEQILKGDDV TVELEASLED LYMGGSLKIW REKNVIKPAP GVRRCRCRNV VRKREVAPGV ILNLSHQECD TCPNVKYVRE
201: GAFINVDIEK GMQDGQEILF YEDGEPKIDG VPGDLKVATF LFSTYYVKER SAWHQLFLTN SIDEQIKIRT ARHERYRRDG NDLHTTVEIS LAEALGGFEK
301: KVTHLDNHEV EIGTKEITRP EEVRKFQGEG MPLYRSNEKG DLYVVFEVVF PEDLADDQKT ELNSIFTGTP SISALGLVAK SKGRQRSMAG VMFLLALLLR
401: FIGSQR

Best Arabidopsis Sequence Match ( AT3G62600.1 )
(BLAST)

001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Arabidopsis Description

ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.