Factsheet for Zm00001d018413_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31305	Sorghum	plastid	81.9	93.76
Os02t0804500-01	Rice	plastid	71.88	83.98
TraesCS6A01G372700.1	Wheat	plastid	69.42	80.94
TraesCS6D01G356800.1	Wheat	plastid	68.89	80.66
TraesCS6B01G410600.1	Wheat	plastid	69.77	80.53
Zm00001d052001_P002	Maize	plastid	81.02	75.08
HORVU0Hr1G017450.8	Barley	cytosol	62.04	72.93
GSMUA_Achr11P...	Banana	plastid	58.17	67.55
VIT_09s0002g07210.t01	Wine grape	plastid	55.89	65.03
Solyc03g116790.2.1	Tomato	plastid	56.41	64.46
KRH09715	Soybean	nucleus, plastid	54.66	63.08
AT1G80030.2	Thale cress	plastid	53.95	61.4
CDY58774	Canola	plastid	53.43	60.8
Bra035201.1-P	Field mustard	plastid	53.08	60.28
CDX87288	Canola	plastid	53.08	60.28
KRH44477	Soybean	plastid	46.05	59.01
KRH23590	Soybean	nucleus	36.56	58.26
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	36.73	42.22
Zm00001d024635_P001	Maize	mitochondrion	36.38	41.99
Zm00001d047195_P001	Maize	mitochondrion	24.08	41.52
Zm00001d028256_P002	Maize	plastid	30.93	32.71
Zm00001d009027_P001	Maize	cytosol	18.45	31.25
Zm00001d035974_P001	Maize	mitochondrion	23.37	31.0
Zm00001d035975_P001	Maize	mitochondrion	23.2	30.77
Zm00001d039000_P001	Maize	mitochondrion	19.51	30.66
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	18.8	30.48
Zm00001d023537_P002	Maize	mitochondrion	22.32	29.88
Zm00001d010958_P001	Maize	cytosol	16.7	29.14
Zm00001d024527_P001	Maize	cytosol	17.75	29.02
Zm00001d016440_P001	Maize	cytosol	17.57	28.9
Zm00001d034368_P001	Maize	extracellular, plasma membrane	21.09	28.71
Zm00001d033210_P002	Maize	nucleus	21.09	28.64
Zm00001d013111_P001	Maize	extracellular, plasma membrane	20.74	28.3
Zm00001d017476_P001	Maize	plasma membrane	20.74	27.96
Zm00001d032347_P001	Maize	cytosol	16.7	27.86
Zm00001d009783_P004	Maize	mitochondrion	17.05	27.71
Zm00001d037586_P001	Maize	endoplasmic reticulum	17.05	26.43
Zm00001d013669_P002	Maize	cytosol	20.74	26.28
Zm00001d039259_P001	Maize	nucleus	18.98	25.06
Zm00001d048538_P001	Maize	nucleus	13.71	24.0
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	7.73	23.91
Zm00001d006666_P001	Maize	nucleus	11.6	22.53
Zm00001d026185_P001	Maize	endoplasmic reticulum	19.86	22.47
Zm00001d009210_P001	Maize	endoplasmic reticulum	15.99	22.41
Zm00001d012242_P001	Maize	cytosol	12.13	21.84
Zm00001d038250_P001	Maize	cytosol	12.83	21.79
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	15.99	21.46
Zm00001d044878_P002	Maize	mitochondrion	18.1	21.02
Zm00001d006563_P001	Maize	mitochondrion	9.67	20.22
Zm00001d006230_P001	Maize	cytosol	10.19	20.0
Zm00001d004840_P001	Maize	mitochondrion	11.95	19.83
Zm00001d045645_P001	Maize	cytosol	8.61	18.42
Zm00001d042653_P001	Maize	plastid	12.83	18.25

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100191825	EntrezGene:100272787	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20
UniProt:A0A1D6HNM7	ProteinID:AQK75895.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF22	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349
UniParc:UPI0008440063	EnsemblPlantsGene:Zm00001d018413	EnsemblPlants:Zm00001d018413_P003	EnsemblPlants:Zm00001d018413_T003	SEG:seg	:

Description

Molecular chaperone Hsp40/DnaJ family protein

Coordinates

chr5:-:220253083..220263862

Molecular Weight (calculated)

61224.0 Da

IEP (calculated)

9.058

GRAVY (calculated)

-0.348

Length

569 amino acids

Sequence
(BLAST)

001: MFTSWSWRRT SDISCAVTMT GGPTLFYPPP CLLPSIPKNC PPLARHGPCI PITICRADQR HQNPQGSLMA PTSMLPFAPS NTSLPYSSRA TTAAAFAPRG
101: LHHAAAGRSG GGQRLACAAP RRRRGGGLVV RASADYYATL GVPRAASNRD IKAAYRKLAR QYHPDVNKEP GATEKFKEIS AAYEVLSDEK KRALYDQYGE
201: AGVKSAVGGS GGAYTTNPFD LFETFFGASM GGFSGMDQSA FRTSRRSTAI QGEDIRYDVI LGFTEAIFGT EKDIILSHLE TCDTCGGSGS KAGSKMRICS
301: TCGGRGQVMR TEQTPFGLFS QVSICPTCAG EGEVISEYCR KCSGEGRIRV RKEIKVKIPP GVSKGSTLRV RGEGDAGPKG GPPGDLFVCL DIEEPSDIKR
401: DGINLYSTVS ISYLEAILGT VMQVCVTVPF NFFHEQVRTV DGTSDLRIPP GIQPGDVIVL AKQGVPSLNK PSIRGDHLFT VKVAIPKRIS GRERELLEEL
501: ASLSNGRFAR TDTKPKPAQP KAIHQEKEVG ASQEDTSKSK EAEGDWLKKL TDFAGSIVNG AAKWLNDNL

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.