Factsheet for Zm00001d035974_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035975_P001	Maize	mitochondrion	97.67	97.67
EER89093	Sorghum	mitochondrion, plastid	91.14	89.89
Os06t0116800-01	Rice	mitochondrion	82.05	79.64
TraesCS7D01G045900.2	Wheat	mitochondrion	71.1	76.44
TraesCS7A01G051000.1	Wheat	mitochondrion	76.46	74.72
HORVU7Hr1G009230.8	Barley	plastid	74.13	71.46
GSMUA_Achr4P11580_001	Banana	mitochondrion	71.1	67.48
GSMUA_Achr3P00410_001	Banana	mitochondrion	67.83	64.67
VIT_13s0064g01360.t01	Wine grape	mitochondrion	65.27	62.08
KRH27511	Soybean	mitochondrion	61.77	59.82
KRH36456	Soybean	mitochondrion	61.31	59.37
KRH43470	Soybean	mitochondrion	60.61	58.56
Solyc01g086740.2.1	Tomato	mitochondrion	59.67	57.79
KRH13903	Soybean	mitochondrion	59.67	57.66
PGSC0003DMT400064990	Potato	mitochondrion	59.21	57.34
Zm00001d023537_P002	Maize	mitochondrion	55.01	55.53
Bra020721.1-P	Field mustard	mitochondrion	57.81	55.48
CDY45921	Canola	mitochondrion	57.81	55.48
CDY35761	Canola	mitochondrion	57.81	55.48
CDY54516	Canola	mitochondrion	58.51	55.41
Bra037514.1-P	Field mustard	mitochondrion	58.28	55.31
AT5G48030.1	Thale cress	mitochondrion	58.74	55.26
CDX86330	Canola	mitochondrion	58.04	54.61
GSMUA_Achr4P12400_001	Banana	mitochondrion	58.28	53.42
Zm00001d024635_P001	Maize	mitochondrion	34.27	29.82
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	33.57	29.09
Zm00001d024527_P001	Maize	cytosol	22.14	27.3
Zm00001d047195_P001	Maize	mitochondrion	20.98	27.27
Zm00001d034368_P001	Maize	extracellular, plasma membrane	26.57	27.27
Zm00001d013111_P001	Maize	extracellular, plasma membrane	26.34	27.1
Zm00001d039000_P001	Maize	mitochondrion	22.84	27.07
Zm00001d009783_P004	Maize	mitochondrion	21.91	26.86
Zm00001d044878_P002	Maize	mitochondrion	30.54	26.73
Zm00001d037586_P001	Maize	endoplasmic reticulum	22.84	26.7
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	21.68	26.5
Zm00001d016440_P001	Maize	cytosol	20.98	26.01
Zm00001d017476_P001	Maize	plasma membrane	25.41	25.83
Zm00001d010958_P001	Maize	cytosol	19.58	25.77
Zm00001d033210_P002	Maize	nucleus	24.94	25.54
Zm00001d009027_P001	Maize	cytosol	19.81	25.3
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	10.72	25.0
Zm00001d048538_P001	Maize	nucleus	18.65	24.62
Zm00001d013669_P002	Maize	cytosol	25.17	24.05
Zm00001d032347_P001	Maize	cytosol	19.11	24.05
Zm00001d018413_P003	Maize	mitochondrion	31.0	23.37
Zm00001d028256_P002	Maize	plastid	28.9	23.05
Zm00001d026185_P001	Maize	endoplasmic reticulum	26.34	22.47
Zm00001d006666_P001	Maize	nucleus	15.15	22.18
Zm00001d052001_P002	Maize	plastid	31.47	21.99
Zm00001d009210_P001	Maize	endoplasmic reticulum	20.75	21.92
Zm00001d012242_P001	Maize	cytosol	16.08	21.84
Zm00001d006563_P001	Maize	mitochondrion	13.52	21.32
Zm00001d039259_P001	Maize	nucleus	20.75	20.65
Zm00001d038250_P001	Maize	cytosol	15.62	20.0
Zm00001d006230_P001	Maize	cytosol	13.52	20.0
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	18.65	18.87
Zm00001d004840_P001	Maize	mitochondrion	14.69	18.37
Zm00001d045645_P001	Maize	cytosol	10.72	17.29
Zm00001d042653_P001	Maize	plastid	15.85	17.0

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:103629395	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ProteinID:AQK80051.1
UniProt:B4FTR0	EMBL:BT040498	EMBL:BT064082	ncoils:Coil	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	UniParc:UPI00017B7ACB	EnsemblPlantsGene:Zm00001d035974	EnsemblPlants:Zm00001d035974_P001	EnsemblPlants:Zm00001d035974_T001	SEG:seg

Description

Chaperone protein dnaJ

Coordinates

chr6:-:63764140..63769331

Molecular Weight (calculated)

46067.3 Da

IEP (calculated)

8.607

GRAVY (calculated)

-0.548

Length

429 amino acids

Sequence
(BLAST)

001: MRLPAGARLA LLLARRSLSS SPRIPRAHTG IWSEAPSRSS PFSPPSSARR SFHGTRPVAA RDYYDVLGVS KSASQAEIKK AYYGLAKKLH PDTNKGDADA
101: ERKFQEVQRA YETLKDEQKR SLYDQVGPDQ YEKTASGGGG TGFEGGFGNP FEDIFGGGGG GGGMNDFFRN IFGDRDFGGR DVKVALELSF VEAVQGCSKT
201: VTFQTSVTCE ICGGAGVPPG TTPETCLSCR GSGFIFMQTG PFRMQSTCTK CGGSGKTVKE FCKACRGNKV VPGRKSVRLD ILPGSDNEDT IKVVRSGGED
301: PDGRPGDLYV TLEVREDPVF RREKGDIHVD AVLNVTQAIL GGTVQVPTLS GDVVLKIKPG TQPGQKVVLR GKGIKTRNSP YHGDQYVHFN VNIPENLTSR
401: QRELIEEFAK EEQGEDEKDA KAAAGASGG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.