Factsheet for AT5G48030.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35761	Canola	mitochondrion	84.43	86.13
CDY45921	Canola	mitochondrion	84.21	85.91
Bra020721.1-P	Field mustard	mitochondrion	84.21	85.91
Bra037514.1-P	Field mustard	mitochondrion	84.43	85.18
CDY54516	Canola	mitochondrion	84.21	84.77
CDX86330	Canola	mitochondrion	84.21	84.21
VIT_13s0064g01360.t01	Wine grape	mitochondrion	62.72	63.41
Solyc01g086740.2.1	Tomato	mitochondrion	60.53	62.3
PGSC0003DMT400064990	Potato	mitochondrion	60.53	62.3
KRH27511	Soybean	mitochondrion	57.89	59.59
Zm00001d035975_P001	Maize	mitochondrion	55.7	59.21
KRH13903	Soybean	mitochondrion	57.46	59.01
KRH36456	Soybean	mitochondrion	57.24	58.92
GSMUA_Achr4P11580_001	Banana	mitochondrion	58.33	58.85
KRH43470	Soybean	mitochondrion	57.24	58.78
Zm00001d035974_P001	Maize	mitochondrion	55.26	58.74
TraesCS7D01G045900.2	Wheat	mitochondrion	51.32	58.65
EER89093	Sorghum	mitochondrion, plastid	55.7	58.39
GSMUA_Achr3P00410_001	Banana	mitochondrion	56.14	56.89
TraesCS7A01G051000.1	Wheat	mitochondrion	53.73	55.81
Os06t0116800-01	Rice	mitochondrion	53.29	54.98
HORVU7Hr1G009230.8	Barley	plastid	53.07	54.38
EES15725	Sorghum	mitochondrion, plastid	48.25	52.51
Os12t0168400-01	Rice	plastid	48.03	52.27
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	47.15	51.07
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	46.93	50.83
TraesCS5A01G117600.1	Wheat	plastid	46.93	50.83
Zm00001d023537_P002	Maize	mitochondrion	47.15	50.59
HORVU5Hr1G036400.3	Barley	plastid	47.15	50.35
GSMUA_Achr4P12400_001	Banana	mitochondrion	50.44	49.15
AT1G28210.2	Thale cress	mitochondrion	31.58	33.72
AT4G39960.1	Thale cress	mitochondrion, plastid	32.68	33.33
AT2G22360.1	Thale cress	plastid	31.58	32.58
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	21.27	28.03
AT1G80030.2	Thale cress	plastid	30.7	28.0
AT3G08910.1	Thale cress	nucleus	19.3	27.24
AT3G44110.1	Thale cress	nucleus	24.34	26.43
AT1G59725.1	Thale cress	cytoskeleton, cytosol, nucleus	18.86	25.98
AT5G01390.1	Thale cress	cytosol	19.08	25.97
AT2G20560.1	Thale cress	cytosol	18.86	25.52
AT5G22060.1	Thale cress	cytosol	23.25	25.3
AT4G28480.1	Thale cress	cytoskeleton, cytosol, nucleus	19.3	25.29
AT1G10350.1	Thale cress	cytosol	19.3	25.21
AT5G25530.1	Thale cress	cytosol	19.08	25.07
AT3G17830.1	Thale cress	plastid	27.63	24.37
AT3G47940.1	Thale cress	cytosol	18.2	23.71
AT2G20550.2	Thale cress	cytosol	11.84	19.01
AT1G44160.1	Thale cress	mitochondrion	10.96	14.01
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	10.96	11.42

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:834854	UniProt:A0A178UJR3
ProteinID:AED95612.1	EMBL:AK118588	ArrayExpress:AT5G48030	EnsemblPlantsGene:AT5G48030	RefSeq:AT5G48030	TAIR:AT5G48030
RefSeq:AT5G48030-TAIR-G	EnsemblPlants:AT5G48030.1	TAIR:AT5G48030.1	EMBL:AY085227	EMBL:AY103490	ProteinID:BAB11067.1
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	Symbol:GFA2	GO:GO:0000003
GO:GO:0000166	GO:GO:0000740	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006457
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008219	GO:GO:0009408	GO:GO:0009553
GO:GO:0009558	GO:GO:0009628	GO:GO:0009653	GO:GO:0009856	GO:GO:0009987	GO:GO:0010197
GO:GO:0010198	GO:GO:0016043	GO:GO:0030154	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
GO:GO:0051085	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	RefSeq:NP_568690.1	ProteinID:OAO93845.1	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PO:PO:0000003	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0005052	PO:PO:0007057	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25
UniProt:Q8GWW8	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI00000ADF5E
SEG:seg	:	:	:	:	:

Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]

Coordinates

chr5:-:19465788..19469939

Molecular Weight (calculated)

49440.5 Da

IEP (calculated)

9.186

GRAVY (calculated)

-0.520

Length

456 amino acids

Sequence
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.