Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97443 | Canola | cytosol | 77.3 | 89.37 |
| AT2G20560.1 | Thale cress | cytosol | 84.2 | 86.94 |
| KRH25647 | Soybean | nucleus | 77.87 | 77.65 |
| KRH55895 | Soybean | endoplasmic reticulum, nucleus | 77.87 | 76.99 |
| Solyc02g077670.2.1 | Tomato | cytosol | 72.41 | 73.47 |
| PGSC0003DMT400081223 | Potato | cytosol | 71.55 | 73.02 |
| KRH10937 | Soybean | cytosol | 70.4 | 72.27 |
| AT3G08910.1 | Thale cress | nucleus | 65.52 | 70.59 |
| KRH21363 | Soybean | cytosol | 61.49 | 69.48 |
| KRH12423 | Soybean | cytoskeleton, cytosol, nucleus | 52.01 | 68.82 |
| AT5G01390.1 | Thale cress | cytosol | 66.09 | 68.66 |
| AT2G20550.2 | Thale cress | cytosol | 50.29 | 61.62 |
| KRH10940 | Soybean | cytosol | 59.2 | 61.31 |
| KRH21362 | Soybean | cytosol | 59.48 | 60.88 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 54.6 | 57.4 |
| AT5G25530.1 | Thale cress | cytosol | 57.18 | 57.35 |
| AT1G10350.1 | Thale cress | cytosol | 56.32 | 56.16 |
| AT3G47940.1 | Thale cress | cytosol | 54.31 | 54.0 |
| KRH40259 | Soybean | cytosol | 24.43 | 53.46 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 31.61 | 31.79 |
| AT1G44160.1 | Thale cress | mitochondrion | 32.18 | 31.37 |
| AT5G22060.1 | Thale cress | cytosol | 33.33 | 27.68 |
| AT3G44110.1 | Thale cress | nucleus | 33.33 | 27.62 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 29.02 | 23.06 |
| AT4G39960.1 | Thale cress | mitochondrion, plastid | 28.74 | 22.37 |
| AT2G22360.1 | Thale cress | plastid | 28.16 | 22.17 |
| AT1G80030.2 | Thale cress | plastid | 28.45 | 19.8 |
| AT5G48030.1 | Thale cress | mitochondrion | 25.29 | 19.3 |
| AT3G17830.1 | Thale cress | plastid | 27.3 | 18.38 |
| AT1G28210.2 | Thale cress | mitochondrion | 22.13 | 18.03 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | EntrezGene:828965 | UniProt:A0A178V4Q1 | ProteinID:AEE85491.1 |
| ArrayExpress:AT4G28480 | EnsemblPlantsGene:AT4G28480 | RefSeq:AT4G28480 | TAIR:AT4G28480 | RefSeq:AT4G28480-TAIR-G | EnsemblPlants:AT4G28480.1 |
| TAIR:AT4G28480.1 | EMBL:AY042845 | EMBL:AY081523 | ProteinID:CAA16887.1 | ProteinID:CAB79650.1 | InterPro:DnaJ_C |
| InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | RefSeq:NP_194577.1 | UniProt:O49457 | ProteinID:OAP00804.1 | PFAM:PF00226 | PFAM:PF01556 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00625 | ScanProsite:PS00636 |
| PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 |
| UniParc:UPI00000A0238 | SEG:seg | : | : | : | : |
Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
Coordinates
chr4:+:14073008..14075271
Molecular Weight (calculated)
38193.4 Da
IEP (calculated)
9.412
GRAVY (calculated)
-0.588
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.