CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	71.39	92.02
KRH21363	Soybean	cytosol	83.48	91.88
KRH25647	Soybean	nucleus	83.19	80.8
KRH55895	Soybean	endoplasmic reticulum, nucleus	82.6	79.55
PGSC0003DMT400081223	Potato	cytosol	79.94	79.47
Solyc02g077670.2.1	Tomato	cytosol	80.24	79.3
CDY65077	Canola	cytosol	76.7	77.38
AT2G20560.1	Thale cress	cytosol	76.11	76.56
CDY13869	Canola	cytosol	76.11	76.33
CDY35188	Canola	cytosol	72.27	75.62
Bra031127.1-P	Field mustard	cytosol	75.22	75.44
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	70.8	74.77
CDY29908	Canola	cytoskeleton, cytosol, nucleus	70.5	74.45
CDX92876	Canola	cytoskeleton, cytosol, nucleus	69.32	73.9
KRH00241	Soybean	cytosol, nucleus	72.57	72.57
CDY38388	Canola	cytosol	72.86	72.22
Bra011031.1-P	Field mustard	cytosol	74.63	71.88
CDX97443	Canola	cytosol	63.72	71.76
KRG88624	Soybean	nucleus	70.8	71.22
KRH65726	Soybean	nucleus	70.5	70.92
AT4G28480.1	Thale cress	cytoskeleton, cytosol, nucleus	72.27	70.4
KRH75968	Soybean	nucleus	69.91	70.33
KRH49388	Soybean	cytosol	71.09	69.65
KRH21362	Soybean	cytosol	68.44	68.24
KRH10940	Soybean	cytosol	67.26	67.86
KRH61858	Soybean	cytosol	25.96	61.97
KRH52529	Soybean	cytosol	58.11	60.43
KRH63415	Soybean	cytosol	25.37	58.5
KRH69388	Soybean	cytosol	47.49	58.33
KRH61857	Soybean	cytosol, nucleus	19.47	56.9
KRG99186	Soybean	cytosol	48.08	56.4
KRH45833	Soybean	cytosol	47.49	55.71
KRH74747	Soybean	cytosol	45.43	55.6
KRH40259	Soybean	cytosol	25.66	54.72
KRH54495	Soybean	nucleus	54.87	52.99
KRH63417	Soybean	nucleus	28.61	47.78
KRH60063	Soybean	endoplasmic reticulum, golgi	27.14	46.46
KRG96505	Soybean	nucleus	35.69	35.28
KRH68242	Soybean	endoplasmic reticulum	35.1	34.69
KRH69236	Soybean	endoplasmic reticulum	33.04	32.37
KRH48754	Soybean	endoplasmic reticulum	37.46	30.24
KRH66593	Soybean	endoplasmic reticulum	37.17	30.0
KRG88903	Soybean	nucleus	36.87	29.98
KRH25334	Soybean	nucleus	36.87	29.98
KRH22611	Soybean	nucleus	36.58	29.74
KRH26709	Soybean	nucleus	36.58	29.74
KRH55068	Soybean	cytosol	11.8	29.2
KRH10414	Soybean	cytosol	30.97	27.56
KRH64663	Soybean	plastid	27.43	26.27
KRH44054	Soybean	cytosol	29.2	25.78
KRH59311	Soybean	plastid	29.79	23.33
KRG97564	Soybean	plastid	30.09	23.18
KRH31310	Soybean	nucleus, plastid	29.5	22.73
KRH43163	Soybean	plastid	29.2	22.65
KRG90292	Soybean	cytosol, nucleus, plastid	18.88	22.38
KRH09715	Soybean	nucleus, plastid	31.27	21.5
KRH44477	Soybean	plastid	27.43	20.95
KRH27511	Soybean	mitochondrion	26.84	20.54
KRH36456	Soybean	mitochondrion	26.55	20.32
KRH43470	Soybean	mitochondrion	25.96	19.82
KRH13903	Soybean	mitochondrion	25.96	19.82
KRH48662	Soybean	nucleus, plastid	30.09	19.43
KRH72418	Soybean	mitochondrion	25.66	18.55
KRH16800	Soybean	mitochondrion	25.66	18.55
KRH23590	Soybean	nucleus	18.88	17.93

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100775897	MapMan:19.1.5.2	Gene3D:2.60.260.20	EMBL:ACUP02009167	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_15G077700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	UniProt:I1MEM7
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH10937	ProteinID:KRH10937	ProteinID:KRH10937.1
PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078
PANTHER:PTHR24078:SF520	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000233BA36	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:5986404..5988453

Molecular Weight (calculated)

37579.9 Da

IEP (calculated)

9.089

GRAVY (calculated)

-0.616

Length

339 amino acids

Sequence
(BLAST)

001: MGVDYYKILQ VDKHATDEEL KKAYRKLAMK WHPDKNPTNK KEAETKFKQI SEAYEVLSDP QKRAIYDEYG EEGLKGQVPP PDAGGHTFFQ TGDGPTTFRF
101: NPRNADDIFA EFFGFSSPFG GGGGGGGNGM RGGSFGGIFG DDIFSSFGEG RTMSQQGPRK AHPIEKTLPC TLEELYKGTT KKMKISREIA DASGKTLPVE
201: EILTIDIKPG WKKGTKITFP EKGNEQPNVI ASDLVFVIDE KPHPVFTRDG NDLVVTQKVS LEEALTGHIV HLTTLNGRVL KIPINNVIHP TYEEVVPREG
301: MPIPKDPSKR GNLRIKFNIK FPAKLTSEQQ AGIKKLLPY

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.