CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10940	Soybean	cytosol	94.71	95.83
KRH10937	Soybean	cytosol	68.24	68.44
KRH25647	Soybean	nucleus	68.24	66.48
KRH55895	Soybean	endoplasmic reticulum, nucleus	68.24	65.91
KRH21363	Soybean	cytosol	59.41	65.58
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	49.71	64.26
CDY35188	Canola	cytosol	60.88	63.89
AT2G20560.1	Thale cress	cytosol	63.24	63.8
CDY65077	Canola	cytosol	62.65	63.39
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	59.41	62.93
KRH00241	Soybean	cytosol, nucleus	62.65	62.83
CDY29908	Canola	cytoskeleton, cytosol, nucleus	59.12	62.62
CDY13869	Canola	cytosol	62.06	62.43
CDX92876	Canola	cytoskeleton, cytosol, nucleus	58.24	62.26
Bra031127.1-P	Field mustard	cytosol	61.47	61.83
KRG88624	Soybean	nucleus	61.18	61.72
CDY38388	Canola	cytosol	62.06	61.7
Bra011031.1-P	Field mustard	cytosol	63.82	61.65
KRH65726	Soybean	nucleus	60.88	61.42
KRH75968	Soybean	nucleus	60.59	61.13
CDX97443	Canola	cytosol	53.82	60.8
KRH49388	Soybean	cytosol	61.47	60.4
AT4G28480.1	Thale cress	cytoskeleton, cytosol, nucleus	60.88	59.48
KRH61858	Soybean	cytosol	23.82	57.04
KRH52529	Soybean	cytosol	52.06	54.29
KRH63415	Soybean	cytosol	22.94	53.06
KRH69388	Soybean	cytosol	42.65	52.54
KRG99186	Soybean	cytosol	44.12	51.9
KRH74747	Soybean	cytosol	42.06	51.62
KRH45833	Soybean	cytosol	43.53	51.21
KRH54495	Soybean	nucleus	50.59	49.0
KRH61857	Soybean	cytosol, nucleus	16.18	47.41
KRH40259	Soybean	cytosol	21.47	45.91
KRH63417	Soybean	nucleus	26.47	44.34
KRH60063	Soybean	endoplasmic reticulum, golgi	23.82	40.91
KRG96505	Soybean	nucleus	30.59	30.32
KRH68242	Soybean	endoplasmic reticulum	30.29	30.03
KRH69236	Soybean	endoplasmic reticulum	29.41	28.9
KRG88903	Soybean	nucleus	33.82	27.58
KRH25334	Soybean	nucleus	33.82	27.58
KRH26709	Soybean	nucleus	33.24	27.1
KRH55068	Soybean	cytosol	10.88	27.01
KRH22611	Soybean	nucleus	32.94	26.86
KRH48754	Soybean	endoplasmic reticulum	32.94	26.67
KRH66593	Soybean	endoplasmic reticulum	32.65	26.43
KRH10414	Soybean	cytosol	28.24	25.2
KRH64663	Soybean	plastid	25.59	24.58
KRH44054	Soybean	cytosol	27.65	24.48
KRG90292	Soybean	cytosol, nucleus, plastid	19.12	22.73
KRH59311	Soybean	plastid	26.76	21.02
KRH31310	Soybean	nucleus, plastid	26.76	20.68
KRH43163	Soybean	plastid	26.47	20.59
KRG97564	Soybean	plastid	26.47	20.45
KRH44477	Soybean	plastid	25.0	19.14
KRH27511	Soybean	mitochondrion	24.41	18.74
KRH48662	Soybean	nucleus, plastid	28.82	18.67
KRH09715	Soybean	nucleus, plastid	26.76	18.46
KRH36456	Soybean	mitochondrion	23.82	18.28
KRH43470	Soybean	mitochondrion	23.53	18.02
KRH13903	Soybean	mitochondrion	23.53	18.02
KRH72418	Soybean	mitochondrion	23.53	17.06
KRH16800	Soybean	mitochondrion	23.24	16.84
KRH23590	Soybean	nucleus	16.76	15.97

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.20.25.170	Gene3D:2.60.260.20	EMBL:ACUP02008354	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_13G235400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	UniProt:I1M1Z6
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH21362	ProteinID:KRH21362	ProteinID:KRH21362.1
PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078
PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000233ADE3	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:34601529..34604996

Molecular Weight (calculated)

37641.9 Da

IEP (calculated)

7.499

GRAVY (calculated)

-0.530

Length

340 amino acids

Sequence
(BLAST)

001: MGMDYYGILE VDRNASDEEL KRAYRKLAMK WHPDKNPTNK KEAEIQFKQI SESYEVLSDP QKRAIFDRYG EGGLNGGMQT PDEGVASFFR TGDGPTAFRF
101: NPRNANNIFA EVFGCSSPFG GMGRGFGCGG SGRGRGMGMG GGSWVSRSFG GMFGNDMFRE GRSMNQGPRR KAPPIENTLL CSLEELYKGS TRKMKISREI
201: THASGRIFLV EEILNIEIHP GWKKGTKITF PEKGNEQPNV IAADLVFIID EKPHSVFTRD GYDLVVTQKI SLKEAEALTG YTIQLTTLDG RGLNIIINNV
301: TDPDYEEVVT GEGMPISKDP SKKGNLRIKF NIEIPDIVGA

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.