Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97927 | Canola | nucleus | 84.25 | 85.22 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 84.47 | 85.06 |
| Bra019886.1-P | Field mustard | nucleus | 84.02 | 84.99 |
| CDY20977 | Canola | nucleus | 78.08 | 84.86 |
| Bra018413.1-P | Field mustard | nucleus | 77.85 | 84.83 |
| CDY20589 | Canola | nucleus | 75.57 | 84.22 |
| Os05t0427900-01 | Rice | cytosol | 15.75 | 43.67 |
| GSMUA_Achr7P03030_001 | Banana | cytosol | 29.68 | 40.88 |
| KRH64663 | Soybean | plastid | 32.42 | 40.11 |
| Solyc06g060240.1.1 | Tomato | cytosol | 31.96 | 36.46 |
| Os01t0875700-01 | Rice | cytosol | 26.94 | 36.09 |
| AT1G44160.1 | Thale cress | mitochondrion | 29.22 | 35.85 |
| PGSC0003DMT400045241 | Potato | extracellular, mitochondrion | 31.51 | 35.84 |
| Zm00001d012242_P001 | Maize | cytosol | 25.34 | 35.13 |
| TraesCS3A01G386400.1 | Wheat | cytosol | 25.57 | 35.0 |
| GSMUA_Achr8P32540_001 | Banana | mitochondrion | 22.15 | 34.89 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 25.8 | 34.88 |
| EES01846 | Sorghum | cytosol | 26.03 | 34.65 |
| TraesCS1B01G278300.1 | Wheat | cytosol | 25.8 | 34.56 |
| TraesCS3B01G418500.1 | Wheat | cytosol | 25.57 | 34.46 |
| TraesCS3D01G379400.1 | Wheat | cytosol | 25.57 | 34.46 |
| TraesCS1D01G267500.1 | Wheat | cytosol | 25.8 | 34.14 |
| TraesCS1A01G267600.1 | Wheat | cytosol | 25.34 | 33.95 |
| AT3G08910.1 | Thale cress | nucleus | 24.66 | 33.44 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 24.2 | 32.02 |
| Zm00001d038250_P001 | Maize | cytosol | 24.43 | 31.94 |
| AT5G01390.1 | Thale cress | cytosol | 24.2 | 31.64 |
| EES19566 | Sorghum | cytosol | 24.2 | 31.18 |
| AT1G10350.1 | Thale cress | cytosol | 24.66 | 30.95 |
| AT3G47940.1 | Thale cress | cytosol | 24.66 | 30.86 |
| AT5G25530.1 | Thale cress | cytosol | 23.74 | 29.97 |
| AT2G20560.1 | Thale cress | cytosol | 23.06 | 29.97 |
| AT4G28480.1 | Thale cress | cytoskeleton, cytosol, nucleus | 23.06 | 29.02 |
| AT2G20550.2 | Thale cress | cytosol | 18.72 | 28.87 |
| Zm00001d042653_P001 | Maize | plastid | 25.34 | 27.75 |
| HORVU0Hr1G000620.4 | Barley | plastid | 21.46 | 23.8 |
| TraesCS6A01G421300.1 | Wheat | cytosol | 10.27 | 21.33 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 15.75 | 19.94 |
| AT3G44110.1 | Thale cress | nucleus | 18.04 | 18.81 |
| AT5G22060.1 | Thale cress | cytosol | 17.58 | 18.38 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 9.36 | 17.67 |
| AT1G28210.2 | Thale cress | mitochondrion | 13.24 | 13.58 |
| AT4G39960.1 | Thale cress | mitochondrion, plastid | 12.33 | 12.08 |
| AT2G22360.1 | Thale cress | plastid | 12.1 | 11.99 |
| AT1G80030.2 | Thale cress | plastid | 13.01 | 11.4 |
| AT5G48030.1 | Thale cress | mitochondrion | 11.42 | 10.96 |
| AT3G17830.1 | Thale cress | plastid | 12.79 | 10.83 |
Protein Annotations
| Gene3D:2.60.260.20 | MapMan:35.1 | EntrezGene:837645 | UniProt:A0A178W1Y6 | ProteinID:AAB65478.1 | ProteinID:AEE28676.1 |
| ArrayExpress:AT1G11040 | EnsemblPlantsGene:AT1G11040 | RefSeq:AT1G11040 | TAIR:AT1G11040 | RefSeq:AT1G11040-TAIR-G | EnsemblPlants:AT1G11040.1 |
| TAIR:AT1G11040.1 | EMBL:DQ056450 | InterPro:DnaJ_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | RefSeq:NP_172571.1 |
| UniProt:O04087 | ProteinID:OAP12529.1 | PFAM:PF01556 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR24078 | PANTHER:PTHR24078:SF522 | SUPFAM:SSF49493 | UniParc:UPI00000A6ED6 | SEG:seg | : |
Description
DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
Coordinates
chr1:-:3678981..3681032
Molecular Weight (calculated)
48158.0 Da
IEP (calculated)
10.432
GRAVY (calculated)
-0.698
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.