Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G418500.1 | Wheat | cytosol | 98.46 | 98.46 |
| TraesCS3A01G386400.1 | Wheat | cytosol | 96.62 | 98.12 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 95.69 | 95.99 |
| TraesCS6A01G421300.1 | Wheat | cytosol | 54.46 | 83.89 |
| EES01846 | Sorghum | cytosol | 81.54 | 80.55 |
| Os01t0875700-01 | Rice | cytosol | 80.31 | 79.82 |
| Zm00001d012242_P001 | Maize | cytosol | 74.15 | 76.27 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 52.0 | 72.84 |
| TraesCS1D01G267500.1 | Wheat | cytosol | 65.85 | 64.65 |
| Zm00001d042653_P001 | Maize | plastid | 76.62 | 62.25 |
| GSMUA_Achr7P03030_001 | Banana | cytosol | 56.92 | 58.18 |
| GSMUA_Achr8P32540_001 | Banana | mitochondrion | 32.92 | 38.49 |
| Solyc11g044450.1.1 | Tomato | nucleus | 38.77 | 36.63 |
| PGSC0003DMT400062759 | Potato | cytosol | 38.77 | 36.31 |
| TraesCS3D01G168500.1 | Wheat | cytosol | 36.0 | 33.91 |
| KRH10414 | Soybean | cytosol | 38.46 | 32.81 |
| KRH44054 | Soybean | cytosol | 38.46 | 32.55 |
| TraesCS1D01G403500.1 | Wheat | cytosol | 35.38 | 31.86 |
| TraesCS7D01G293900.1 | Wheat | cytosol | 33.85 | 31.79 |
| VIT_12s0034g02190.t01 | Wine grape | nucleus | 33.23 | 31.49 |
| CDY66166 | Canola | plastid | 33.23 | 31.03 |
| CDY14974 | Canola | nucleus | 32.62 | 30.64 |
| KRH64663 | Soybean | plastid | 33.23 | 30.51 |
| Bra036942.1-P | Field mustard | nucleus | 32.62 | 30.37 |
| AT1G44160.1 | Thale cress | mitochondrion | 33.23 | 30.25 |
| Bra032204.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 33.23 | 29.83 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 31.38 | 29.65 |
| Solyc06g060240.1.1 | Tomato | cytosol | 33.54 | 28.39 |
| CDY20977 | Canola | nucleus | 35.08 | 28.29 |
| PGSC0003DMT400045241 | Potato | extracellular, mitochondrion | 33.23 | 28.05 |
| CDY20589 | Canola | nucleus | 33.85 | 27.99 |
| Bra018413.1-P | Field mustard | nucleus | 34.46 | 27.86 |
| CDX97927 | Canola | nucleus | 35.69 | 26.79 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 35.69 | 26.67 |
| Bra019886.1-P | Field mustard | nucleus | 35.38 | 26.56 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 34.46 | 25.57 |
| KRG90292 | Soybean | cytosol, nucleus, plastid | 22.46 | 25.52 |
| TraesCS1D01G107200.1 | Wheat | nucleus | 23.08 | 21.43 |
| TraesCS5D01G434100.1 | Wheat | nucleus | 25.54 | 19.71 |
| TraesCS6D01G232600.1 | Wheat | nucleus | 24.92 | 19.06 |
| TraesCS5D01G382400.1 | Wheat | plastid | 24.62 | 19.0 |
| TraesCS7D01G045900.2 | Wheat | mitochondrion | 20.92 | 17.04 |
| TraesCS5D01G129700.1 | Wheat | mitochondrion, plastid | 19.08 | 14.73 |
| TraesCS6D01G356800.1 | Wheat | plastid | 20.31 | 13.58 |
| TraesCS7D01G177900.1 | Wheat | mitochondrion | 19.38 | 13.15 |
| TraesCS4D01G241300.2 | Wheat | plastid | 19.69 | 11.85 |
| TraesCS5D01G125500.1 | Wheat | nucleus | 19.08 | 11.52 |
Protein Annotations
| Gene3D:1.10.287.110 | Gene3D:2.60.260.20 | MapMan:35.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF01556 |
| PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF517 | SMART:SM00271 | SUPFAM:SSF46565 |
| SUPFAM:SSF49493 | EnsemblPlantsGene:TraesCS3D01G379400 | EnsemblPlants:TraesCS3D01G379400.1 | TIGR:cd06257 | TIGR:cd10747 | SEG:seg |
Description
No Description!
Coordinates
chr3D:+:496402507..496404685
Molecular Weight (calculated)
35743.1 Da
IEP (calculated)
9.581
GRAVY (calculated)
-0.444
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPPELYHR ILDVPRGTSS QGLRAAYKGL ARKWHPDKHP PASKPEAEAR FKAITEAYEA LLDQQENRAV FGVCNDDRAA EMFGTFGAGG GGGGARMART
101: RSDDFCMRSA PATPAREFTK VYSSGNTGGR RAFAEFSSSI MRKAPPLERA LECTLEELCR GCKKQVKFTR DVVTKNGSIV KKEVTQAIMV KPGWRKGHKV
201: TLDGMGDERP GCLPADAVFT VAEKKHSMFK RVGDDLVLKA KVPLVNALTG WSFSFRLLSG KKVSCKFDDE VICPGYEKVI KGEGMPIAEQ RGARGDLRVK
301: LEIVFPEQLT DEQRAGLAEI LKDCT
101: RSDDFCMRSA PATPAREFTK VYSSGNTGGR RAFAEFSSSI MRKAPPLERA LECTLEELCR GCKKQVKFTR DVVTKNGSIV KKEVTQAIMV KPGWRKGHKV
201: TLDGMGDERP GCLPADAVFT VAEKKHSMFK RVGDDLVLKA KVPLVNALTG WSFSFRLLSG KKVSCKFDDE VICPGYEKVI KGEGMPIAEQ RGARGDLRVK
301: LEIVFPEQLT DEQRAGLAEI LKDCT
001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
Arabidopsis Description
At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.