Factsheet for TraesCS3D01G168500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G161200.1	Wheat	nucleus	97.1	97.1
TraesCS3B01G192300.1	Wheat	cytosol	96.52	96.52
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	79.13	78.22
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	96.23	77.21
EES02163	Sorghum	cytosol	75.07	76.85
Zm00001d009027_P001	Maize	cytosol	72.75	74.7
GSMUA_Achr8P16030_001	Banana	cytosol	71.59	74.62
GSMUA_Achr2P19740_001	Banana	cytosol	64.06	68.63
TraesCS1D01G403500.1	Wheat	cytosol	67.25	64.27
GSMUA_Achr11P...	Banana	cytosol	66.96	61.76
Zm00001d039259_P001	Maize	nucleus	74.78	59.86
TraesCS1D01G072800.1	Wheat	nucleus	55.07	55.23
TraesCS7D01G293900.1	Wheat	cytosol	53.62	53.47
TraesCS3D01G379400.1	Wheat	cytosol	33.91	36.0
TraesCS1D01G107200.1	Wheat	nucleus	34.78	34.29
TraesCS1D01G267500.1	Wheat	cytosol	31.88	33.23
TraesCS5D01G382400.1	Wheat	plastid	36.23	29.69
TraesCS5D01G434100.1	Wheat	nucleus	35.36	28.98
TraesCS6D01G232600.1	Wheat	nucleus	34.78	28.24
TraesCS7D01G045900.2	Wheat	mitochondrion	25.8	22.31
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	25.51	20.9
TraesCS6D01G356800.1	Wheat	plastid	28.12	19.96
TraesCS5D01G125500.1	Wheat	nucleus	29.57	18.96
TraesCS4D01G241300.2	Wheat	plastid	27.25	17.41
TraesCS7D01G177900.1	Wheat	mitochondrion	24.06	17.33

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.20.25.170	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR24078	PANTHER:PTHR24078:SF301	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCS3D01G168500
EnsemblPlants:TraesCS3D01G168500.1	TIGR:cd06257	TIGR:cd10747	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:143139018..143142622

Molecular Weight (calculated)

37646.9 Da

IEP (calculated)

9.559

GRAVY (calculated)

-0.529

Length

345 amino acids

Sequence
(BLAST)

001: MGVDYYKVLG VDRGASDDDL KKAYRKLAMR WHPDKNPTTK KEAEAKFKQI SEAYEVLSDS QKRTIYDQLG EEGLKGQPPP GAGGPGASSF YPGGGQSTSF
101: HFNPRSADDI FAEFFGFSGP SFVGGMPGGS MRGEPRSYGG GVFSNEYLAS RFAEGSAGNM PRPSHKPAPI ENRLPVTLAD LYKGVAKKMK ISREVTETSG
201: RVSQVEEILT IDVKPGWKKG TKITFPEKGN ESPSMMPADI VFIIEEKPHD VFTREGNDLV MTQKISLVEA LTGYTVQLTT LDGRSLSIQV NSVINPSYEE
301: VIPGEGMPIP KEPGKKGNLR VKFIIKFPSR LTSDQKAGIK RLLGS

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.