Factsheet for TraesCS3A01G161200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G168500.1	Wheat	cytosol	97.1	97.1
TraesCS3B01G192300.1	Wheat	cytosol	95.94	95.94
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	78.84	77.94
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	95.65	76.74
EES02163	Sorghum	cytosol	74.78	76.56
Zm00001d009027_P001	Maize	cytosol	72.75	74.7
GSMUA_Achr8P16030_001	Banana	cytosol	70.43	73.41
GSMUA_Achr2P19740_001	Banana	cytosol	63.19	67.7
TraesCS1A01G395300.1	Wheat	cytosol	67.83	62.9
GSMUA_Achr11P...	Banana	cytosol	66.09	60.96
Zm00001d039259_P001	Maize	nucleus	74.78	59.86
TraesCS1A01G070300.1	Wheat	cytosol	54.78	55.75
TraesCS3A01G520100.1	Wheat	cytosol	41.16	53.18
TraesCS7A01G298000.1	Wheat	cytosol	52.17	52.02
TraesCS6A01G087000.1	Wheat	cytosol	47.83	48.96
TraesCS3A01G386400.1	Wheat	cytosol	32.75	35.31
TraesCS1A01G099300.1	Wheat	nucleus	34.78	34.29
TraesCS1A01G267600.1	Wheat	cytosol	30.72	32.42
TraesCS5A01G372900.1	Wheat	nucleus	35.36	28.98
TraesCS5A01G426100.1	Wheat	nucleus	34.78	28.5
TraesCS6A01G250800.1	Wheat	nucleus	34.49	28.0
TraesCS6A01G421300.1	Wheat	cytosol	14.78	24.17
TraesCS5A01G115000.1	Wheat	plastid	28.7	23.86
TraesCS5A01G117600.1	Wheat	plastid	26.09	21.38
TraesCS7A01G051000.1	Wheat	mitochondrion	25.22	19.82
TraesCS6A01G372700.1	Wheat	plastid	27.83	19.67
TraesCS7A01G176600.1	Wheat	mitochondrion	24.06	17.44
TraesCS4A01G064300.2	Wheat	plastid	25.8	16.48

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF301
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCS3A01G161200	EnsemblPlants:TraesCS3A01G161200.1	TIGR:cd06257
TIGR:cd10747	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:162756053..162759732

Molecular Weight (calculated)

37822.2 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.541

Length

345 amino acids

Sequence
(BLAST)

001: MGVDYYKVLG VDRGASDDDL KKAYRKLAMR WHPDKNPTTK KEAEAKFKQI SEAYEVLSDF QKRTIYDQLG EEGLKGQPPP GAGGPGASSF YPGGGQSTSF
101: HFNPRSADDI FAEFFGFSGP SFLGGMPGGS MRGEPRSYGG GVFSNEYLAK RFAEGSAGNM PRPSHKPAPI ENQLSVTLAD LYKGVAKKMK ISREVIETSG
201: RVSQVEEILT IDVKPGWKKG TKITFPEKGN ESPSMMPADI VFIIEEKPHD VFTREGNDLV MTQKISLVEA LTGYTVQLTT LDGRSLSRQV NSVIHPSYEE
301: VIPGEGMPIP KEPCKKGNLR VKFSIKFPSR LTSDQKAGIK RLLGS

Best Arabidopsis Sequence Match ( AT4G28480.1 )
(BLAST)

001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.