Factsheet for TraesCS3A01G520100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G059600.1	Wheat	cytosol	94.38	79.0
TraesCS3B01G587800.1	Wheat	cytosol	94.38	78.02
HORVU3Hr1G113710.2	Barley	plastid	76.03	59.88
EES13688	Sorghum	cytosol	76.4	57.46
Zm00001d032347_P001	Maize	cytosol	72.66	56.89
GSMUA_AchrUn_...	Banana	cytosol	56.55	50.5
KRH52529	Soybean	cytosol	57.68	47.24
PGSC0003DMT400083824	Potato	cytosol	57.3	47.22
CDX80523	Canola	cytosol	56.18	46.73
CDX88188	Canola	cytosol	56.18	46.73
Bra009848.1-P	Field mustard	cytosol	55.06	46.52
KRH61858	Soybean	cytosol	24.72	46.48
CDY54902	Canola	cytosol	57.68	46.25
Bra020505.1-P	Field mustard	cytosol	57.68	46.25
CDY05498	Canola	cytosol	57.68	46.25
VIT_04s0008g04300.t01	Wine grape	cytosol	56.55	44.54
AT5G25530.1	Thale cress	cytosol	57.3	44.09
Os08t0374400-00	Rice	plastid	63.67	43.7
TraesCS7A01G298000.1	Wheat	cytosol	53.93	41.62
TraesCS3A01G161200.1	Wheat	nucleus	53.18	41.16
TraesCS1A01G395300.1	Wheat	cytosol	55.81	40.05
TraesCS6A01G087000.1	Wheat	cytosol	47.94	37.98
TraesCS1A01G070300.1	Wheat	cytosol	45.32	35.69
KRH61857	Soybean	cytosol, nucleus	13.86	31.9
TraesCS3A01G386400.1	Wheat	cytosol	31.46	26.25
TraesCS1A01G267600.1	Wheat	cytosol	31.84	25.99
TraesCS6A01G421300.1	Wheat	cytosol	18.73	23.7
TraesCS5A01G426100.1	Wheat	nucleus	36.7	23.28
TraesCS1A01G099300.1	Wheat	nucleus	29.96	22.86
TraesCS5A01G372900.1	Wheat	nucleus	33.71	21.38
TraesCS6A01G250800.1	Wheat	nucleus	33.33	20.94
TraesCS5A01G115000.1	Wheat	plastid	29.21	18.8
TraesCS6A01G372700.1	Wheat	plastid	29.96	16.39
TraesCS5A01G117600.1	Wheat	plastid	24.72	15.68
TraesCS7A01G051000.1	Wheat	mitochondrion	25.09	15.26
TraesCS4A01G064300.2	Wheat	plastid	27.72	13.7
TraesCS7A01G176600.1	Wheat	mitochondrion	22.85	12.82

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF218
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCS3A01G520100	EnsemblPlants:TraesCS3A01G520100.1	TIGR:cd06257
TIGR:cd10747	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:737315938..737317144

Molecular Weight (calculated)

29393.4 Da

IEP (calculated)

5.688

GRAVY (calculated)

-0.712

Length

267 amino acids

Sequence
(BLAST)

001: MGSVDYYEIL NVDRSATDDD LRRAYRQLAM RWHPDKNPTG DKDSEAKFKD ITQAYNVLSD ASKRAVYDQH GEEGLKGPPQ QPADDIFAEF FGSTPFTYCN
101: NVRGRQRTAW DGGGVGRPHG AGDQGVGAPP PPVETKLACT LEELYTGVTK NMKISRNVVD SSGRTKTESE VLSIEVKPGW KKGTKITFPG KGNQQWNQLP
201: ADLVFAIDER PHHMYRRDGK DLVTDVRLTL AEALGTVIVL PTLDGRELAV DVGGGQEEEA PHGSPRL

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.