Factsheet for TraesCSU01G059600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G587800.1	Wheat	cytosol	95.92	94.74
TraesCS3A01G520100.1	Wheat	cytosol	79.0	94.38
HORVU3Hr1G113710.2	Barley	plastid	78.37	73.75
EES13688	Sorghum	cytosol	77.12	69.3
Zm00001d032347_P001	Maize	cytosol	71.79	67.16
GSMUA_AchrUn_...	Banana	cytosol	55.8	59.53
PGSC0003DMT400083824	Potato	cytosol	56.11	55.25
KRH52529	Soybean	cytosol	56.11	54.91
CDY54902	Canola	cytosol	56.74	54.35
CDY05498	Canola	cytosol	56.74	54.35
Bra020505.1-P	Field mustard	cytosol	56.74	54.35
CDX88188	Canola	cytosol	54.55	54.21
Bra009848.1-P	Field mustard	cytosol	53.6	54.11
CDX80523	Canola	cytosol	54.23	53.89
Os08t0374400-00	Rice	plastid	65.2	53.47
KRH61857	Soybean	cytosol, nucleus	19.44	53.45
VIT_04s0008g04300.t01	Wine grape	cytosol	55.17	51.92
AT5G25530.1	Thale cress	cytosol	56.11	51.59
KRH61858	Soybean	cytosol	21.0	47.18
TraesCSU01G019500.1	Wheat	nucleus	48.28	45.7

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF218
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCSU01G059600	EnsemblPlants:TraesCSU01G059600.1	TIGR:cd06257
TIGR:cd10747	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:46263818..46265185

Molecular Weight (calculated)

35535.2 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.624

Length

319 amino acids

Sequence
(BLAST)

001: MGSVDYYEIL NVDRSATDDD LRRAYRRLAM RWHPDKNPTG DKDSEAKFKD ITQAYNVLSD ASKRAVYDQY GEEGLKGPPQ QPVDDIFAEF FGSTPFTYCN
101: NARGRQRPAC DGSGFGRPYG AGDQGGGAPP RAPPVETKLA CTLEELYTGI TKNMKISRNV VDSSGRMKTE SEVLSIEVKP GWKKGTKITF PGKGNQQWNQ
201: LPADLVFAID ERPHHMYRRD GKDLVTDVRL TLAEALGMVI VLPTLDGREL AVDVGGGQEE EAPMVRPGYE LVVPMEGMPI AREPGRRGSL RIRFDVIFPD
301: RLKRDARLQI KRILEADAA

Best Arabidopsis Sequence Match ( AT1G59725.1 )
(BLAST)

001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.