Factsheet for TraesCS7A01G176600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G177900.1	Wheat	mitochondrion	97.48	96.87
TraesCS7B01G081600.2	Wheat	mitochondrion	97.27	96.26
KXG19604	Sorghum	mitochondrion	68.49	70.11
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	39.08	53.6
Zm00001d044878_P002	Maize	mitochondrion	54.41	52.86
GSMUA_Achr6P02160_001	Banana	mitochondrion	52.1	52.43
KRH16800	Soybean	mitochondrion	46.22	46.91
AT1G28210.2	Thale cress	mitochondrion	41.81	46.6
KRH72418	Soybean	mitochondrion	45.8	46.48
Solyc01g081330.2.1	Tomato	plastid	40.76	44.7
CDX90134	Canola	mitochondrion	40.34	44.65
Bra010892.1-P	Field mustard	mitochondrion	40.13	44.42
CDY35719	Canola	mitochondrion	39.5	37.83
TraesCS7A01G051000.1	Wheat	mitochondrion	32.14	34.85
TraesCS5A01G117600.1	Wheat	plastid	30.67	34.68
TraesCS5A01G115000.1	Wheat	plastid	27.1	31.08
TraesCS1A01G070300.1	Wheat	cytosol	18.28	25.66
TraesCS6A01G372700.1	Wheat	plastid	26.26	25.61
TraesCS1A01G395300.1	Wheat	cytosol	19.33	24.73
TraesCS1A01G099300.1	Wheat	nucleus	17.86	24.29
TraesCS3A01G161200.1	Wheat	nucleus	17.44	24.06
TraesCS5A01G426100.1	Wheat	nucleus	20.8	23.52
TraesCS6A01G250800.1	Wheat	nucleus	20.59	23.06
TraesCS3A01G520100.1	Wheat	cytosol	12.82	22.85
TraesCS7A01G298000.1	Wheat	cytosol	16.39	22.54
TraesCS5A01G372900.1	Wheat	nucleus	19.75	22.33
TraesCS6A01G087000.1	Wheat	cytosol	14.92	21.07
TraesCS4A01G064300.2	Wheat	plastid	23.32	20.56
TraesCS3A01G386400.1	Wheat	cytosol	12.82	19.06
TraesCS1A01G267600.1	Wheat	cytosol	13.03	18.96
TraesCS6A01G421300.1	Wheat	cytosol	6.3	14.22

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43096	PANTHER:PTHR43096:SF27	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
EnsemblPlantsGene:TraesCS7A01G176600	EnsemblPlants:TraesCS7A01G176600.1	TIGR:cd06257	TIGR:cd10719	TIGR:cd10747	SEG:seg

Description

No Description!

Coordinates

chr7A:-:129871254..129880062

Molecular Weight (calculated)

52734.6 Da

IEP (calculated)

9.405

GRAVY (calculated)

-0.429

Length

476 amino acids

Sequence
(BLAST)

001: MGRFGWLRLA SRSLARRSGE ASAQRSAWIR PSTPCTSSGA DRCYGRSTFI SSVPSRFFHS TGQRYSMDKD YYKVLGVTKD ASQDDIKKAF QSLAKKYHPD
101: TNRGNTAAKR MFQEVRDAYE TLRDPSKRQQ YDMLFSGGSA ANSTRGRGEF DGSYQDPFSR FNKQNDDPFA QFYRQNDGPF SNQFYKVFSE VFQHDVDVHA
201: SDIEIELNLS FGEAAKGCTK EVPFSAKNLC YSCDGRGYLA NARKYVCPSC KGAGKVSMYP FTSICTTCRG FGKVIKDHCL TCKGAGVVDG MKYANVIIPA
301: GVDSGDTIHV REAGNSGGRG AIPGSLYIKL RVASDPVFVR DGADVHVDKK ISFTQAMLGG KIEVPTLDGK TEIKIPKGVQ PGQVVVLRGK GLELPNQAGY
401: FGDQHVRFKI HFPLKVNERQ RALLEDFAAE EATKEQSFFA TGNWSELIVE NMKSQNFMIG LGFVMLIYLM LSKAVS

Best Arabidopsis Sequence Match ( AT1G28210.2 )
(BLAST)

001: MRRFNWVLRH VQARRTFDSA IGLRQGSQKP LFERYIHATG INNSSARNYY DVLGVSPKAT REEIKKSFHE LAKKFHPDTN RNNPSAKRKF QEIREAYETL
101: GNSERREEYD KLQYRNSDYV NNDGGDSERF RRAYQSNFSD TFHKIFSEIF ENNQIKPDIR VELSLSLSEA AEGCTKRLSF DAYVFCDSCD GLGHPSDAAM
201: SICPTCRGVG RVTIPPFTAS CQTCKGTGHI IKEYCMSCRG SGIVEGTKTA ELVIPGGVES EATITIVGAG NVSSRTSQPG NLYIKLKVAN DSTFTRDGSD
301: IYVDANISFT QAILGGKVVV PTLSGKIQLD IPKGTQPDQL LVLRGKGLPK QGFFVDHGDQ YVRFRVNFPT EVNERQRAIL EEFAKEEINN ELSDSAEGSW
401: WNLTGPQIIR DFSLMVLLAL LLSRLMG

Arabidopsis Description

ATJ1DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4HWI4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.