Factsheet for GSMUA_Achr6P02160_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	44.4	60.52
KXG19604	Sorghum	mitochondrion	53.7	54.62
TraesCS7B01G081600.2	Wheat	mitochondrion	53.7	52.81
TraesCS7D01G177900.1	Wheat	mitochondrion	53.28	52.61
TraesCS7A01G176600.1	Wheat	mitochondrion	52.43	52.1
Solyc01g081330.2.1	Tomato	plastid	46.09	50.23
KRH16800	Soybean	mitochondrion	48.84	49.25
AT1G28210.2	Thale cress	mitochondrion	44.4	49.18
KRH72418	Soybean	mitochondrion	48.63	49.04
CDX90134	Canola	mitochondrion	42.71	46.98
Bra010892.1-P	Field mustard	mitochondrion	42.49	46.74
Zm00001d044878_P002	Maize	mitochondrion	43.34	41.84
CDY35719	Canola	mitochondrion	42.92	40.85
GSMUA_Achr3P00410_001	Banana	mitochondrion	32.56	34.22
GSMUA_Achr4P11580_001	Banana	mitochondrion	32.35	33.85
GSMUA_AchrUn_...	Banana	cytosol	9.73	30.67
GSMUA_Achr4P12400_001	Banana	mitochondrion	29.18	29.49
GSMUA_Achr1P15780_001	Banana	plastid	27.7	29.44
GSMUA_Achr3P00920_001	Banana	mitochondrion	27.7	28.98
GSMUA_AchrUn_...	Banana	cytosol	18.18	28.76
GSMUA_Achr6P13820_001	Banana	cytosol	9.73	26.9
GSMUA_Achr1P01630_001	Banana	cytosol	13.32	26.58
GSMUA_Achr3P15480_001	Banana	cytosol	16.28	26.37
GSMUA_Achr11P...	Banana	plastid	27.27	26.33
GSMUA_Achr11P...	Banana	cytosol	21.14	26.25
GSMUA_Achr8P11020_001	Banana	nucleus	21.78	25.75
GSMUA_Achr4P20410_001	Banana	cytosol	28.54	25.71
GSMUA_Achr4P12330_001	Banana	nucleus	17.55	25.3
GSMUA_AchrUn_...	Banana	cytosol	17.12	25.08
GSMUA_Achr8P16030_001	Banana	cytosol	17.55	25.08
GSMUA_Achr2P19740_001	Banana	cytosol	16.91	24.84
GSMUA_Achr4P31390_001	Banana	cytosol	21.35	24.28
GSMUA_Achr9P25940_001	Banana	nucleus	21.35	24.22
GSMUA_Achr6P29960_001	Banana	nucleus	21.14	24.15
GSMUA_Achr9P23300_001	Banana	cytosol	17.55	24.13
GSMUA_Achr4P22790_001	Banana	cytosol	21.14	23.92
GSMUA_Achr7P01290_001	Banana	nucleus	20.93	23.74
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	16.91	23.26
GSMUA_Achr11P...	Banana	cytosol	18.18	22.99
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	25.79	22.39
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	16.49	20.91
GSMUA_Achr7P03030_001	Banana	cytosol	13.11	19.5
GSMUA_Achr6P15600_001	Banana	cytosol	18.18	19.46
GSMUA_Achr8P32540_001	Banana	mitochondrion	7.4	12.59

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr6G02160_001	EnsemblPlants:GSMUA_Achr6P02160_001
EnsemblPlants:GSMUA_Achr6T02160_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0T3G4	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF27	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI00029586D7

Description

Chaperone protein dnaJ 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G02160_001]

Coordinates

chr6:-:1388768..1403228

Molecular Weight (calculated)

52392.1 Da

IEP (calculated)

8.894

GRAVY (calculated)

-0.439

Length

473 amino acids

Sequence
(BLAST)

001: MGRLWLGIPK RSLPSLFLSR KAFGRPWSSP IMGSPLGLVQ GRKEAFSPFM RAISHLSTRY ETNGGIVEGT HDFMRLRTFL LSRFFHATGP CYAIERDYYE
101: ILGIPQDASL DDIKKAFHAL AKKYHPDANK NNPTSKRKFQ EIRDAYETLR DPKKRAKYDK KSVQGSEKVG YAADDTEGFH EAYHDPFSEF HKTNHGPFSN
201: SFFKIFTEVF EHERETYAAD TQVELNISFS EAAKGCIKQV SFTSQVLCSS CHGRGHPVNA KPSRCPTCNG VGTVTVFPFT STCSSCRGLG KIIKDHCSAC
301: RGLGVVDGVK NVNVTIPAGV DSGDTISVPN AGNQGGNGVH PGNLYIKLQV DKDPVFLRDG SDVYVDTHIS FTQAMIAILG GNVEVPTLSG KTKVKIPKGV
401: QPGQLLILRG RGLPKQIGLV DHGDQYVRFR VHFPSSVNDR QRELLEEFAK EEANQESYGF ADGNWLYQQL STG

Best Arabidopsis Sequence Match ( AT1G28210.1 )
(BLAST)

001: MRRFNWVLRH VQARRTFDSA IGLRQGSQKP LFERYIHATG INNSSARNYY DVLGVSPKAT REEIKKSFHE LAKKFHPDTN RNNPSAKRKF QEIREAYETL
101: GNSERREEYD KLQYRNSDYV NNDGGDSERF RRAYQSNFSD TFHKIFSEIF ENNQIKPDIR VELSLSLSEA AEGCTKRLSF DAYVFCDSCD GLGHPSDAAM
201: SICPTCRGVG RVTIPPFTAS CQTCKGTGHI IKEYCMSCRG SGIVEGTKTA ELVIPGGVES EATITIVGAG NVSSRTSQPG NLYIKLKVAN DSTFTRDGSD
301: IYVDANISFT QAILGGKVVV PTLSGKIQLD IPKGTQPDQL LVLRGKGLPK QGFFVDHGDQ YVRFRVNFPT EVNERQRAIL EEFAKEEINN ELSDSAEGSW
401: LYQKLSTG

Arabidopsis Description

ATJ1DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4HWI4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.