Factsheet for GSMUA_AchrUn_randomP25570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P13820_001	Banana	cytosol	34.67	30.41
GSMUA_Achr4P31390_001	Banana	cytosol	78.67	28.37
GSMUA_Achr4P22790_001	Banana	cytosol	76.0	27.27
GSMUA_Achr7P01290_001	Banana	nucleus	75.33	27.1
GSMUA_Achr6P29960_001	Banana	nucleus	74.67	27.05
GSMUA_Achr8P11020_001	Banana	nucleus	71.33	26.75
GSMUA_Achr9P25940_001	Banana	nucleus	74.0	26.62
GSMUA_Achr11P...	Banana	cytosol	67.33	26.51
GSMUA_Achr1P01630_001	Banana	cytosol	40.0	25.32
GSMUA_AchrUn_...	Banana	cytosol	41.33	20.74
GSMUA_Achr3P15480_001	Banana	cytosol	38.0	19.52
GSMUA_Achr8P16030_001	Banana	cytosol	41.33	18.73
GSMUA_Achr4P12330_001	Banana	nucleus	36.67	16.77
GSMUA_AchrUn_...	Banana	cytosol	36.0	16.72
GSMUA_Achr2P19740_001	Banana	cytosol	35.33	16.46
GSMUA_Achr11P...	Banana	cytosol	38.67	15.51
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	35.33	15.41
GSMUA_Achr9P23300_001	Banana	cytosol	34.0	14.83
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	36.0	14.48
Os12t0619100-00	Rice	cytosol	39.33	13.72
GSMUA_Achr6P15600_001	Banana	cytosol	40.0	13.57
GSMUA_Achr3P00920_001	Banana	mitochondrion	36.0	11.95
GSMUA_Achr1P15780_001	Banana	plastid	34.0	11.46
GSMUA_Achr11P...	Banana	plastid	36.0	11.02
GSMUA_Achr3P00410_001	Banana	mitochondrion	32.0	10.67
GSMUA_Achr4P11580_001	Banana	mitochondrion	32.0	10.62
GSMUA_Achr4P20410_001	Banana	cytosol	35.33	10.1
GSMUA_Achr6P02160_001	Banana	mitochondrion	30.67	9.73
GSMUA_Achr4P12400_001	Banana	mitochondrion	28.67	9.19
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	31.33	8.62
GSMUA_Achr7P03030_001	Banana	cytosol	18.0	8.49
GSMUA_Achr8P32540_001	Banana	mitochondrion	6.0	3.24

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP25570_001	EnsemblPlants:GSMUA_AchrUn_randomT25570_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG25570_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR43888	PANTHER:PTHR43888:SF4	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002968A25
UniProt:M0UCB5	MapMan:35.1	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG25570_001]

Coordinates

chrchrUn_random:-:126188456..126189512

Molecular Weight (calculated)

16820.0 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.635

Length

150 amino acids

Sequence
(BLAST)

001: MFGRAPKKSD NTKYYEILGV PKDASQEDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE GMGGGGGHNP FDIFESFFGG
101: NPFGGMFLAM FAPPLSMSDV LPGLDHTYKH TCKVFISMFV YKYGCERNLP

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.