Factsheet for GSMUA_Achr3P00410_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P11580_001	Banana	mitochondrion	77.56	77.21
EER89093	Sorghum	mitochondrion, plastid	66.44	68.74
Zm00001d035975_P001	Maize	mitochondrion	65.11	68.3
Zm00001d035974_P001	Maize	mitochondrion	64.67	67.83
VIT_13s0064g01360.t01	Wine grape	mitochondrion	66.22	66.08
TraesCS7D01G045900.2	Wheat	mitochondrion	58.22	65.66
Os06t0116800-01	Rice	mitochondrion	62.89	64.03
TraesCS7A01G051000.1	Wheat	mitochondrion	62.22	63.78
HORVU7Hr1G009230.8	Barley	plastid	60.67	61.35
KRH43470	Soybean	mitochondrion	60.44	61.26
GSMUA_Achr4P12400_001	Banana	mitochondrion	63.33	60.9
KRH36456	Soybean	mitochondrion	59.56	60.5
KRH27511	Soybean	mitochondrion	59.56	60.5
KRH13903	Soybean	mitochondrion	59.33	60.14
Solyc01g086740.2.1	Tomato	mitochondrion	58.89	59.82
PGSC0003DMT400064990	Potato	mitochondrion	58.44	59.37
CDY54516	Canola	mitochondrion	57.78	57.4
Bra020721.1-P	Field mustard	mitochondrion	56.67	57.05
CDY35761	Canola	mitochondrion	56.67	57.05
CDY45921	Canola	mitochondrion	56.67	57.05
Bra037514.1-P	Field mustard	mitochondrion	57.11	56.86
CDX86330	Canola	mitochondrion	57.56	56.8
AT5G48030.1	Thale cress	mitochondrion	56.89	56.14
GSMUA_Achr6P02160_001	Banana	mitochondrion	34.22	32.56
GSMUA_Achr1P15780_001	Banana	plastid	32.0	32.36
GSMUA_AchrUn_...	Banana	cytosol	10.67	32.0
GSMUA_Achr3P00920_001	Banana	mitochondrion	32.0	31.86
GSMUA_AchrUn_...	Banana	cytosol	19.56	29.43
GSMUA_Achr1P01630_001	Banana	cytosol	14.89	28.27
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	21.33	27.91
GSMUA_Achr4P20410_001	Banana	cytosol	32.0	27.43
GSMUA_Achr3P15480_001	Banana	cytosol	17.56	27.05
GSMUA_Achr8P16030_001	Banana	cytosol	19.78	26.89
GSMUA_Achr11P...	Banana	plastid	28.89	26.53
GSMUA_Achr6P13820_001	Banana	cytosol	10.0	26.32
GSMUA_Achr4P12330_001	Banana	nucleus	19.11	26.22
GSMUA_Achr11P...	Banana	cytosol	22.0	25.98
GSMUA_Achr8P11020_001	Banana	nucleus	22.89	25.75
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	21.33	25.74
GSMUA_Achr6P29960_001	Banana	nucleus	23.33	25.36
GSMUA_Achr4P22790_001	Banana	cytosol	23.56	25.36
GSMUA_AchrUn_...	Banana	cytosol	18.0	25.08
GSMUA_Achr4P31390_001	Banana	cytosol	23.11	25.0
GSMUA_Achr7P01290_001	Banana	nucleus	23.11	24.94
GSMUA_Achr9P25940_001	Banana	nucleus	23.11	24.94
GSMUA_Achr9P23300_001	Banana	cytosol	18.22	23.84
GSMUA_Achr2P19740_001	Banana	cytosol	16.89	23.6
GSMUA_Achr11P...	Banana	cytosol	19.56	23.53
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	28.44	23.49
GSMUA_Achr7P03030_001	Banana	cytosol	14.89	21.07
GSMUA_Achr6P15600_001	Banana	cytosol	20.44	20.81
GSMUA_Achr8P32540_001	Banana	mitochondrion	7.11	11.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr3G00410_001	EnsemblPlants:GSMUA_Achr3P00410_001
EnsemblPlants:GSMUA_Achr3T00410_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0SAK9	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0002963AAC
SEG:seg	:	:	:	:	:

Description

Putative DnaJ homolog 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G00410_001]

Coordinates

chr3:-:327284..338397

Molecular Weight (calculated)

48775.8 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.484

Length

450 amino acids

Sequence
(BLAST)

001: MRTGGARLVF WFARRSLRSK LIEDSPIPSL EDSSCRLASG KCSSCRSFTN GRSEAARSKR GTLDGAFRSL FSPSRSFHGT RSLLLRDFYD VLGVSKDASA
101: SDIKKAYYAL AKKLHPDTNK DDADAEKKFQ EVQHAYEVLK DEDKRRLYDQ VGPNAFEQAA SGGGPDGPGG PFGSGFGNPF EDIFGMNDFF KNVFRDTDYG
201: GQNVKVSLEI SFMEAVQGCT KTVTFQAPVN CNACGGTGVP PGTRPETCRP CRGSGMIFMQ NGPLRLQTTC SHCGGSGKHV KSFCKSCKGQ RVVGGTKSVK
301: VDVMAGVDDN ETIKIYRSGG ADPESNQPGD LYVTIKVRED PVFRRDKANI LVDTVLSVTQ AMLGGTVQVP TLTGDVVLKV KPGTQPGQKV VLKGKGIKTR
401: SSSYYGDQYV HFSVVIPVNL TRRQRMLIEE FAKEEQGNSE KQEAAAGASG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.