Factsheet for Os06t0116800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89093	Sorghum	mitochondrion, plastid	81.0	82.3
Zm00001d035974_P001	Maize	mitochondrion	79.64	82.05
Zm00001d035975_P001	Maize	mitochondrion	79.19	81.59
TraesCS7A01G051000.1	Wheat	mitochondrion	76.92	77.45
TraesCS7D01G045900.2	Wheat	mitochondrion	69.0	76.44
HORVU7Hr1G009230.8	Barley	plastid	74.66	74.16
GSMUA_Achr4P11580_001	Banana	mitochondrion	69.46	67.92
GSMUA_Achr3P00410_001	Banana	mitochondrion	64.03	62.89
VIT_13s0064g01360.t01	Wine grape	mitochondrion	61.76	60.53
KRH27511	Soybean	mitochondrion	58.14	58.01
KRH36456	Soybean	mitochondrion	57.69	57.56
Os12t0168400-01	Rice	plastid	53.17	56.09
KRH43470	Soybean	mitochondrion	56.33	56.08
Solyc01g086740.2.1	Tomato	mitochondrion	56.11	55.98
PGSC0003DMT400064990	Potato	mitochondrion	55.88	55.76
KRH13903	Soybean	mitochondrion	55.66	55.41
GSMUA_Achr4P12400_001	Banana	mitochondrion	57.47	54.27
Bra020721.1-P	Field mustard	mitochondrion	54.75	54.14
CDY35761	Canola	mitochondrion	54.75	54.14
CDY45921	Canola	mitochondrion	54.75	54.14
Bra037514.1-P	Field mustard	mitochondrion	54.98	53.76
CDY54516	Canola	mitochondrion	54.98	53.64
CDX86330	Canola	mitochondrion	55.2	53.51
AT5G48030.1	Thale cress	mitochondrion	54.98	53.29
Os05t0333500-01	Rice	mitochondrion, plastid	35.52	35.12
Os05t0334000-01	Rice	mitochondrion, plastid	35.52	35.12
Os05t0334400-01	Rice	mitochondrion, plastid	35.52	35.12
Os02t0804500-01	Rice	plastid	31.9	28.95
Os05t0562300-01	Rice	nucleus	22.4	27.35
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	21.04	26.65
Os02t0306900-01	Rice	cytosol	20.81	26.36
Os03t0787300-01	Rice	plasma membrane	24.43	25.9
Os02t0656500-01	Rice	nucleus	24.43	25.71
Os08t0161900-01	Rice	cytosol	19.68	25.44
Os05t0156500-01	Rice	cytosol, nucleus	8.37	25.34
Os03t0648400-02	Rice	nucleus	23.76	25.18
Os12t0619100-00	Rice	cytosol	24.43	25.12
Os04t0549600-01	Rice	cytosol	22.85	24.28
Os02t0128400-01	Rice	cytosol	18.1	23.6
Os05t0427900-01	Rice	cytosol	8.14	22.78
Os01t0875700-01	Rice	cytosol	15.61	21.1
Os08t0374400-00	Rice	plastid	16.06	18.25

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:4339933	EMBL:AK058985
ProteinID:BAD67919.1	ProteinID:BAF18537.1	ProteinID:BAS95852.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	ProteinID:EEE67798.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0000740	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006457	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008219	GO:GO:0009408	GO:GO:0009558	GO:GO:0009628	GO:GO:0009653	GO:GO:0009856
GO:GO:0009987	GO:GO:0010197	GO:GO:0010198	GO:GO:0016043	GO:GO:0030154	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	GO:GO:0051085	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	EnsemblPlantsGene:Os06g0116800
EnsemblPlants:Os06t0116800-01	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	UniProt:Q5VRK6	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0000457CF7	RefSeq:XP_015643217.1	SEG:seg

Description

DnaJ domain protein A9Similar to GFA2. (Os06t0116800-01);Similar to GFA2. (Os06t0116800-02)

Coordinates

chr6:-:927344..932583

Molecular Weight (calculated)

47380.0 Da

IEP (calculated)

9.398

GRAVY (calculated)

-0.507

Length

442 amino acids

Sequence
(BLAST)

001: MRLPGDARLA LLLARRRALP SSSPAASASP FHGSRAHGAR WGDAFRAAAP AWRSPFSSPT SARLFHGTRP VAARDYYDVL GVSRNASQGE IKKAYYALAK
101: KLHPDTNKGD SDAERKFQEV QRAYETLKDD QKRSLYDQVG PDQYEKASAG GGPGGAYEGG FGNPFEDIFG GGGGGGGMND FFRNIFRERE FSGHDAKVAL
201: EISFMEAVQG CTKTINFQTA VTCDTCKGAG VPPGTKPETC LACRGSGFIF MQTGPFRMQS TCTQCGGSGK TVKEFCKSCK GRKVVPGTKN IRLNIVPGTD
301: DGDVIKLVRS GGADPDGGSP GDLYVTLKVR EDPVFRREKG DIHVDAVLNV TQAILGGTVQ VPTLSGDVVL KVKPGTQPGQ KVVLRGKGIK TRNSSYYGDQ
401: YVHFNVNIPA NLTPRQRVLI EEFAKEEQAE EEKDAKAAGA SG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.