Factsheet for Os12t0168400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15725	Sorghum	mitochondrion, plastid	82.1	82.1
TraesCS5A01G117600.1	Wheat	plastid	79.47	79.1
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	79.24	78.86
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	78.52	78.15
Zm00001d023537_P002	Maize	mitochondrion	79.24	78.12
HORVU5Hr1G036400.3	Barley	plastid	79.24	77.75
KRH27511	Soybean	mitochondrion	56.56	53.5
VIT_13s0064g01360.t01	Wine grape	mitochondrion	57.28	53.22
Os06t0116800-01	Rice	mitochondrion	56.09	53.17
KRH43470	Soybean	mitochondrion	55.85	52.7
KRH13903	Soybean	mitochondrion	55.61	52.48
KRH36456	Soybean	mitochondrion	55.13	52.14
Solyc01g086740.2.1	Tomato	mitochondrion	54.89	51.92
PGSC0003DMT400064990	Potato	mitochondrion	54.42	51.47
Bra020721.1-P	Field mustard	mitochondrion	51.79	48.55
CDY35761	Canola	mitochondrion	51.79	48.55
CDY45921	Canola	mitochondrion	51.79	48.55
CDY54516	Canola	mitochondrion	52.03	48.12
AT5G48030.1	Thale cress	mitochondrion	52.27	48.03
Bra037514.1-P	Field mustard	mitochondrion	51.55	47.79
CDX86330	Canola	mitochondrion	51.79	47.59
Os05t0333500-01	Rice	mitochondrion, plastid	32.94	30.87
Os05t0334000-01	Rice	mitochondrion, plastid	32.94	30.87
Os05t0334400-01	Rice	mitochondrion, plastid	32.94	30.87
Os02t0804500-01	Rice	plastid	32.22	27.72
Os05t0562300-01	Rice	nucleus	22.91	26.52
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	21.24	25.5
Os05t0156500-01	Rice	cytosol, nucleus	8.83	25.34
Os02t0306900-01	Rice	cytosol	21.0	25.21
Os08t0161900-01	Rice	cytosol	19.81	24.27
Os03t0787300-01	Rice	plasma membrane	24.11	24.22
Os03t0648400-02	Rice	nucleus	23.63	23.74
Os02t0656500-01	Rice	nucleus	23.39	23.33
Os02t0128400-01	Rice	cytosol	18.85	23.3
Os04t0549600-01	Rice	cytosol	22.43	22.6
Os12t0619100-00	Rice	cytosol	22.2	21.63
Os05t0427900-01	Rice	cytosol	7.64	20.25
Os01t0875700-01	Rice	cytosol	14.56	18.65
Os08t0374400-00	Rice	plastid	15.99	17.22

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:4351608	ProteinID:ABA95914.1
EMBL:AK065706	ProteinID:BAF29273.1	ProteinID:BAT16048.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	ProteinID:EEE52829.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152
EnsemblPlantsGene:Os12g0168400	EnsemblPlants:Os12t0168400-01	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF24	UniProt:Q2QX63
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000068198C	RefSeq:XP_015618300.1
SEG:seg	:	:	:	:	:

Description

DnaJ domain protein A11Similar to GFA2. (Os12t0168400-01)

Coordinates

chr12:+:3455590..3463006

Molecular Weight (calculated)

45700.1 Da

IEP (calculated)

8.584

GRAVY (calculated)

-0.500

Length

419 amino acids

Sequence
(BLAST)

001: MARAAASRLA AAATSTSTLE MFSRHLAAAS SAWGIASSRA PYPGRERRSA SWWCPTRSFH ATRGMNARDY YDVLGVNKDA SASDIKKAYY LLAKKFHPDT
101: NKEDADAEKK FQEVQHAYEV LKDDDKRETY DQLGAEAYER QASGGGPDDF SGSHPFGDIF GDMFDNPFAM RGGRDVKVPI KLSFMEAVQG CRKTIAYEAD
201: VFCDTCNGSG VPPGTVPQTC KACRGAGVIF MQRGIMSIET TCSRCGGSGK IVKNFCKTCK GEQLVKGKKS VKLDIMAGID DNDTMKVFGK GGADVERNKP
301: GDLYVTIKIR EDPVFRREGN HVHVDAIISI AQAVLGGTVT VPTLTGNVSV KVRQGTQPGE KVVLRGKGIK ARNSPAYGNQ YIHFNVRVPT DVTQRQRELM
401: EEFDKEECNE GERVAAASG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.