Factsheet for Os03t0648400-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033210_P002	Maize	nucleus	96.4	95.94
EER93745	Sorghum	nucleus	96.16	95.7
GSMUA_Achr4P31390_001	Banana	cytosol	89.69	89.9
Zm00001d013669_P002	Maize	cytosol	95.68	88.86
GSMUA_Achr6P29960_001	Banana	nucleus	88.01	88.65
GSMUA_Achr4P22790_001	Banana	cytosol	88.73	88.52
GSMUA_Achr9P25940_001	Banana	nucleus	88.25	88.25
VIT_06s0080g01230.t01	Wine grape	cytosol	87.29	87.29
Os03t0787300-01	Rice	plasma membrane	87.05	87.05
KRH25334	Soybean	nucleus	87.05	87.05
VIT_13s0073g00560.t01	Wine grape	cytosol	86.81	87.02
KRG88903	Soybean	nucleus	86.57	86.57
GSMUA_Achr7P01290_001	Banana	nucleus	86.09	86.09
KRH22611	Soybean	nucleus	84.17	84.17
KRH26709	Soybean	nucleus	83.45	83.45
AT3G44110.1	Thale cress	nucleus	82.97	82.38
CDY09117	Canola	nucleus	82.97	81.8
CDX92386	Canola	nucleus	82.73	81.75
Bra002385.1-P	Field mustard	nucleus	82.73	81.75
CDX92385	Canola	nucleus	82.49	81.52
Bra020169.1-P	Field mustard	nucleus	82.49	81.32
Bra002386.1-P	Field mustard	nucleus	82.25	81.28
CDY65546	Canola	nucleus	81.53	80.76
AT5G22060.1	Thale cress	cytosol	80.34	79.95
Bra006608.1-P	Field mustard	nucleus	75.54	77.21
CDX88812	Canola	nucleus	75.54	77.21
CDY16617	Canola	nucleus	37.89	75.96
CDX70980	Canola	nucleus	73.86	75.68
Os02t0656500-01	Rice	nucleus	74.34	73.81
Os04t0549600-01	Rice	cytosol	71.94	72.12
Os12t0619100-00	Rice	cytosol	44.6	43.26
Os05t0156500-01	Rice	cytosol, nucleus	12.71	36.3
Os05t0562300-01	Rice	nucleus	30.46	35.08
Os08t0161900-01	Rice	cytosol	28.54	34.8
Os02t0306900-01	Rice	cytosol	28.78	34.38
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	28.54	34.1
Os02t0128400-01	Rice	cytosol	26.62	32.74
Os05t0427900-01	Rice	cytosol	10.55	27.85
Os01t0875700-01	Rice	cytosol	20.14	25.69
Os08t0374400-00	Rice	plastid	23.02	24.68
Os05t0334400-01	Rice	mitochondrion, plastid	26.14	24.38
Os05t0334000-01	Rice	mitochondrion, plastid	26.14	24.38
Os05t0333500-01	Rice	mitochondrion, plastid	26.14	24.38
Os02t0804500-01	Rice	plastid	27.82	23.82
Os06t0116800-01	Rice	mitochondrion	25.18	23.76
Os12t0168400-01	Rice	plastid	23.74	23.63

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:4333580	ProteinID:AAU89194.1
ProteinID:ABF97899.1	ProteinID:ABF97901.1	EMBL:AK105028	EMBL:AY224432	ProteinID:BAF12693.1	ProteinID:BAS85492.1
ncoils:Coil	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	ProteinID:EAZ27951.1
EMBL:EU267988	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	EnsemblPlantsGene:Os03g0648400
EnsemblPlants:Os03t0648400-02	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43888	PANTHER:PTHR43888:SF4	UniProt:Q84PD0	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000005F8A1	RefSeq:XP_015630926.1	SEG:seg

Description

DnaJ domain protein A4, YDJ1 proteinSimilar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)

Coordinates

chr3:+:25127263..25130981

Molecular Weight (calculated)

46488.2 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.778

Length

417 amino acids

Sequence
(BLAST)

001: MFGRAPKKSD NTKYYEILGV PKTASQDDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE GMGGGGSHVD PFDIFSSFFG
101: PSFGGGGSSR GRRQRRGEDV IHPLKVSLED LYNGTSKKLS LSRNVLCAKC KGKGSKSGAS MRCPGCQGSG MKITIRQLGP SMIQQMQQPC NECKGTGESI
201: NEKDRCPGCK GEKVIQEKKV LEVHVEKGMQ HNQKITFPGE ADEAPDTVTG DIVFVLQQKD HSKFKRKGDD LFYEHTLSLT EALCGFQFVL THLDNRQLLI
301: KSNPGEVVKP DQFKAINDEG MPMYQRPFMK GKLYIHFTVE FPDSLAPEQC KALEAVLPPK PASQLTEMEI DECEETTMHD VNNIEEEMRR KAQAAQEAYD
401: EDDEMPGGAQ RVQCAQQ

Best Arabidopsis Sequence Match ( AT3G44110.1 )
(BLAST)

001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ

Arabidopsis Description

ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.