Factsheet for GSMUA_Achr6P29960_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P25940_001	Banana	nucleus	92.03	91.37
GSMUA_Achr4P31390_001	Banana	cytosol	91.79	91.35
GSMUA_Achr4P22790_001	Banana	cytosol	91.79	90.91
VIT_13s0073g00560.t01	Wine grape	cytosol	89.13	88.7
GSMUA_Achr7P01290_001	Banana	nucleus	88.89	88.25
Os03t0648400-02	Rice	nucleus	88.65	88.01
VIT_06s0080g01230.t01	Wine grape	cytosol	87.92	87.29
EER93745	Sorghum	nucleus	88.16	87.11
KRH25334	Soybean	nucleus	87.44	86.81
Zm00001d033210_P002	Maize	nucleus	87.44	86.4
KRG88903	Soybean	nucleus	86.96	86.33
KRH22611	Soybean	nucleus	84.78	84.17
KRH26709	Soybean	nucleus	84.06	83.45
AT3G44110.1	Thale cress	nucleus	82.85	81.67
Bra002385.1-P	Field mustard	nucleus	83.09	81.52
CDX92385	Canola	nucleus	82.85	81.28
CDX92386	Canola	nucleus	82.85	81.28
Bra002386.1-P	Field mustard	nucleus	82.61	81.04
CDY65546	Canola	nucleus	82.13	80.76
Zm00001d013669_P002	Maize	cytosol	87.2	80.4
CDY09117	Canola	nucleus	81.88	80.14
Bra020169.1-P	Field mustard	nucleus	81.4	79.67
AT5G22060.1	Thale cress	cytosol	79.71	78.76
Bra006608.1-P	Field mustard	nucleus	75.36	76.47
CDX88812	Canola	nucleus	75.36	76.47
CDX70980	Canola	nucleus	73.67	74.94
GSMUA_AchrUn_...	Banana	cytosol	27.05	74.67
GSMUA_Achr11P...	Banana	cytosol	68.6	74.54
GSMUA_Achr8P11020_001	Banana	nucleus	71.98	74.5
CDY16617	Canola	nucleus	36.72	73.08
GSMUA_Achr1P01630_001	Banana	cytosol	27.78	48.52
GSMUA_AchrUn_...	Banana	cytosol	31.16	43.14
GSMUA_Achr3P15480_001	Banana	cytosol	28.02	39.73
GSMUA_Achr8P16030_001	Banana	cytosol	31.64	39.58
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	31.4	37.79
GSMUA_AchrUn_...	Banana	cytosol	29.47	37.77
GSMUA_Achr4P12330_001	Banana	nucleus	28.74	36.28
GSMUA_Achr9P23300_001	Banana	cytosol	29.71	35.76
GSMUA_Achr2P19740_001	Banana	cytosol	27.54	35.4
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	31.16	34.58
GSMUA_Achr6P13820_001	Banana	cytosol	14.01	33.92
GSMUA_Achr11P...	Banana	cytosol	29.95	33.16
GSMUA_Achr6P15600_001	Banana	cytosol	28.74	26.92
GSMUA_Achr7P03030_001	Banana	cytosol	19.81	25.79
GSMUA_Achr1P15780_001	Banana	plastid	26.81	24.94
GSMUA_Achr3P00920_001	Banana	mitochondrion	27.05	24.78
GSMUA_Achr4P11580_001	Banana	mitochondrion	26.33	24.11
GSMUA_Achr3P00410_001	Banana	mitochondrion	25.36	23.33
GSMUA_Achr11P...	Banana	plastid	27.29	23.06
GSMUA_Achr4P20410_001	Banana	cytosol	27.05	21.33
GSMUA_Achr6P02160_001	Banana	mitochondrion	24.15	21.14
GSMUA_Achr4P12400_001	Banana	mitochondrion	23.19	20.51
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	25.85	19.63
GSMUA_Achr8P32540_001	Banana	mitochondrion	12.08	17.99

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr6G29960_001
EnsemblPlants:GSMUA_Achr6P29960_001	EnsemblPlants:GSMUA_Achr6T29960_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0TBE1	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43888	PANTHER:PTHR43888:SF4	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
UniParc:UPI00029585EE	SEG:seg	:	:	:	:

Description

DnaJ protein homolog [Source:GMGC_GENE;Acc:GSMUA_Achr6G29960_001]

Coordinates

chr6:-:30083175..30085627

Molecular Weight (calculated)

46324.1 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.755

Length

414 amino acids

Sequence
(BLAST)

001: MFGRAPKKSN NTKYYEVLGV PKSASQDDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE GMGGGGGHDP FDIFSSFFGG
101: SPFGGGSSRG RRQRRGEDVI HPLKVSLEDL YNGTSKKLSL SRNVICRKCK GKGSKSGASM KCSGCQGIGM KVTIRQFGPG MIQQMQHPCN ECKGTGETIN
201: EKDRCLQCKG EKVVQEKKVL EVVVEKGMQN GQKITFPGEA DEAPDTVTGD IVFILQQKDH PKFKRKGDDI FYEHTLSLTE ALCGFQFVLT HLDNRQLLIK
301: SNPGEVVKPD QFKAIDDEGM PMYQRPFMRG KLYIHFTVDF PDSLTPDQCK ALEAVLPPRQ ALQMTEMELD ECEETILNNV NIEEEMRRKQ AQSQEAYDED
401: DDVHGGARVQ CAQQ

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.