Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92385 | Canola | nucleus | 98.81 | 98.58 |
| CDX92386 | Canola | nucleus | 98.1 | 97.87 |
| CDY09117 | Canola | nucleus | 94.77 | 94.33 |
| CDY16617 | Canola | nucleus | 46.56 | 94.23 |
| AT5G22060.1 | Thale cress | cytosol | 89.31 | 89.74 |
| CDX88812 | Canola | nucleus | 85.99 | 88.73 |
| CDX70980 | Canola | nucleus | 83.37 | 86.24 |
| KRH25334 | Soybean | nucleus | 83.37 | 84.17 |
| PGSC0003DMT400060145 | Potato | cytosol | 83.37 | 83.77 |
| PGSC0003DMT400005019 | Potato | cytosol | 83.37 | 83.77 |
| KRG88903 | Soybean | nucleus | 82.9 | 83.69 |
| Solyc11g006460.1.1 | Tomato | nucleus | 82.9 | 83.29 |
| Solyc05g055160.2.1 | Tomato | nucleus | 82.9 | 83.29 |
| VIT_06s0080g01230.t01 | Wine grape | cytosol | 82.42 | 83.21 |
| KRH22611 | Soybean | nucleus | 82.19 | 82.97 |
| VIT_13s0073g00560.t01 | Wine grape | cytosol | 81.95 | 82.93 |
| KXG37403 | Sorghum | cytosol | 81.95 | 82.54 |
| GSMUA_Achr4P31390_001 | Banana | cytosol | 81.47 | 82.45 |
| KRH26709 | Soybean | nucleus | 81.47 | 82.25 |
| GSMUA_Achr6P29960_001 | Banana | nucleus | 80.76 | 82.13 |
| Zm00001d013111_P001 | Maize | extracellular, plasma membrane | 81.24 | 82.01 |
| Solyc04g009770.2.1 | Tomato | nucleus | 81.24 | 81.82 |
| Zm00001d034368_P001 | Maize | extracellular, plasma membrane | 81.24 | 81.82 |
| Os03t0648400-02 | Rice | nucleus | 80.76 | 81.53 |
| EER93745 | Sorghum | nucleus | 81.0 | 81.38 |
| PGSC0003DMT400065401 | Potato | nucleus | 81.0 | 81.38 |
| GSMUA_Achr4P22790_001 | Banana | cytosol | 80.76 | 81.34 |
| Os03t0787300-01 | Rice | plasma membrane | 80.52 | 81.3 |
| TraesCS5D01G382400.1 | Wheat | plastid | 81.0 | 81.0 |
| Zm00001d033210_P002 | Maize | nucleus | 80.52 | 80.91 |
| HORVU5Hr1G092610.3 | Barley | nucleus | 81.0 | 80.81 |
| TraesCS5A01G372900.1 | Wheat | nucleus | 80.76 | 80.76 |
| TraesCS5B01G374900.1 | Wheat | nucleus | 80.76 | 80.76 |
| GSMUA_Achr9P25940_001 | Banana | nucleus | 79.81 | 80.58 |
| GSMUA_Achr7P01290_001 | Banana | nucleus | 77.67 | 78.42 |
| PGSC0003DMT400007728 | Potato | nucleus | 77.67 | 78.04 |
| Solyc11g071830.1.1 | Tomato | plastid | 77.2 | 77.75 |
| Zm00001d006666_P001 | Maize | nucleus | 52.73 | 75.77 |
| Zm00001d013669_P002 | Maize | cytosol | 80.52 | 75.5 |
| Zm00001d031357_P001 | Maize | cytosol, nucleus, plastid | 32.54 | 74.46 |
| Zm00001d048538_P001 | Maize | nucleus | 55.58 | 72.0 |
| Zm00001d006230_P001 | Maize | cytosol | 48.22 | 70.0 |
| Zm00001d045645_P001 | Maize | cytosol | 44.18 | 69.92 |
| Zm00001d006563_P001 | Maize | mitochondrion | 43.23 | 66.91 |
| Zm00001d026185_P001 | Maize | endoplasmic reticulum | 74.82 | 62.62 |
| Zm00001d004840_P001 | Maize | mitochondrion | 49.41 | 60.64 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 28.74 | 38.05 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 28.98 | 38.01 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 29.45 | 37.92 |
| CDX76646 | Canola | golgi | 31.12 | 37.86 |
| CDY11430 | Canola | golgi | 31.12 | 37.86 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 31.12 | 37.75 |
| CDY35188 | Canola | cytosol | 28.98 | 37.65 |
| CDX89142 | Canola | endoplasmic reticulum | 30.88 | 37.46 |
| CDX97443 | Canola | cytosol | 26.6 | 37.21 |
| CDY63310 | Canola | endoplasmic reticulum | 30.64 | 37.18 |
| CDY65077 | Canola | cytosol | 29.45 | 36.9 |
| CDY13869 | Canola | cytosol | 29.45 | 36.69 |
| CDY64940 | Canola | nucleus | 28.03 | 35.98 |
| CDY54902 | Canola | cytosol | 28.27 | 35.74 |
| CDY05498 | Canola | cytosol | 28.27 | 35.74 |
| CDY38388 | Canola | cytosol | 28.98 | 35.67 |
| CDY37986 | Canola | cytosol | 19.95 | 35.59 |
| CDY58657 | Canola | cytosol | 27.55 | 35.58 |
| CDX80523 | Canola | cytosol | 27.08 | 35.51 |
| CDY20944 | Canola | cytosol | 25.65 | 35.41 |
| CDY27963 | Canola | cytosol | 27.55 | 35.26 |
| CDX88188 | Canola | cytosol | 26.84 | 35.2 |
| CDY22173 | Canola | cytosol | 28.03 | 35.12 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 27.79 | 35.03 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 28.03 | 35.01 |
| CDY07893 | Canola | cytosol | 26.84 | 34.98 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 27.08 | 34.44 |
| CDX83026 | Canola | cytosol | 26.37 | 33.84 |
| CDY36915 | Canola | cytosol | 26.84 | 33.83 |
| CDY20637 | Canola | cytosol | 25.42 | 33.44 |
| CDY21803 | Canola | nucleus | 26.6 | 33.14 |
| CDX68447 | Canola | cytosol | 26.84 | 32.94 |
| CDY24146 | Canola | cytosol | 26.84 | 29.97 |
| CDY54516 | Canola | mitochondrion | 25.65 | 23.84 |
| CDY35761 | Canola | mitochondrion | 25.18 | 23.71 |
| CDY45921 | Canola | mitochondrion | 25.18 | 23.71 |
| CDX86330 | Canola | mitochondrion | 25.65 | 23.68 |
| CDX89453 | Canola | plastid | 24.94 | 23.23 |
| CDY25588 | Canola | plastid | 24.94 | 23.13 |
| CDY63891 | Canola | cytosol | 25.42 | 22.02 |
| CDY58774 | Canola | plastid | 26.13 | 22.0 |
| CDX87288 | Canola | plastid | 26.13 | 21.96 |
| CDX90134 | Canola | mitochondrion | 22.09 | 21.63 |
| CDX69371 | Canola | mitochondrion | 25.42 | 21.36 |
| CDY66166 | Canola | plastid | 17.34 | 20.98 |
| CDY14974 | Canola | nucleus | 17.1 | 20.81 |
| CDX92166 | Canola | plastid | 24.94 | 20.79 |
| CDX95817 | Canola | plastid | 24.7 | 20.68 |
| CDY35719 | Canola | mitochondrion | 21.85 | 18.51 |
| CDY20977 | Canola | nucleus | 16.86 | 17.62 |
| CDY20589 | Canola | nucleus | 16.15 | 17.3 |
| CDX97927 | Canola | nucleus | 17.34 | 16.86 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 17.34 | 16.78 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.10.230.10 | Gene3D:2.60.260.20 | GO:A0A078JIF1 | UniProt:A0A078JIF1 |
| EnsemblPlants:CDY65546 | ProteinID:CDY65546 | ProteinID:CDY65546.1 | InterPro:DnaJ | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0006457 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0031072 | GO:GO:0046872 | GO:GO:0051082 | EnsemblPlantsGene:GSBRNA2T00046786001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:HSP_DnaJ_Cys-rich_dom |
| InterPro:HSP_DnaJ_Cys-rich_dom_sf | InterPro:IPR001305 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | HAMAP:MF_01152 |
| PFAM:PF00226 | PFAM:PF00684 | PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 |
| PFscan:PS51188 | PANTHER:PTHR43888 | PANTHER:PTHR43888:SF4 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 |
| SUPFAM:SSF57938 | UniParc:UPI0004EE3FCD | SEG:seg | : | : | : |
Description
BnaCnng47600DBnaCnng47600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIF1]
Coordinates
chrLK034832:-:150..1973
Molecular Weight (calculated)
46385.6 Da
IEP (calculated)
6.250
GRAVY (calculated)
-0.799
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRGPSSKS DNTKFYEILG VPKTASPEDL KKAYKKAAIK NHPDKGGDPE KFKEIAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGGSPFGGG SSRGRRQRRG EDVVHPLKVS LEDLYLGTTK KLSLSRNTLC SKCNGKGSKS GASSTCSGCQ GSGMKVSIRQ LGPGMIQQMQ HPCHDCKGTG
201: ETINDRDRCP QCKGDKVVSE KKVLEVAVEK GMQHSQKITF SGQADEAPDT VTGDIVFVIQ QKEHPKFKRK GDDLFVEHTL SLTEALCGFQ FVLTHLDKRQ
301: LLIKSSPGEV VKPDSYRAIT DEGMPVHQRP FMKGKLYIHF TVDFPDSLSP DQTKAIEAVL PKPKADLSDM ETDECEETTL HEVNIEDEMR RKAQAQREAY
401: DDDDDDEEGP GGPQRVQCAQ Q
101: GGGGSPFGGG SSRGRRQRRG EDVVHPLKVS LEDLYLGTTK KLSLSRNTLC SKCNGKGSKS GASSTCSGCQ GSGMKVSIRQ LGPGMIQQMQ HPCHDCKGTG
201: ETINDRDRCP QCKGDKVVSE KKVLEVAVEK GMQHSQKITF SGQADEAPDT VTGDIVFVIQ QKEHPKFKRK GDDLFVEHTL SLTEALCGFQ FVLTHLDKRQ
301: LLIKSSPGEV VKPDSYRAIT DEGMPVHQRP FMKGKLYIHF TVDFPDSLSP DQTKAIEAVL PKPKADLSDM ETDECEETTL HEVNIEDEMR RKAQAQREAY
401: DDDDDDEEGP GGPQRVQCAQ Q
001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KDEEEGTSSK RGL
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KDEEEGTSSK RGL
Arabidopsis Description
ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.