Factsheet for Zm00001d013111_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37403	Sorghum	cytosol	97.12	96.89
Zm00001d034368_P001	Maize	extracellular, plasma membrane	96.88	96.65
Zm00001d006666_P001	Maize	nucleus	65.95	93.86
Os03t0787300-01	Rice	plasma membrane	92.09	92.09
Zm00001d048538_P001	Maize	nucleus	70.5	90.46
TraesCS5D01G434100.1	Wheat	nucleus	90.65	89.79
TraesCS5B01G428000.1	Wheat	nucleus	90.65	89.79
TraesCS5A01G426100.1	Wheat	nucleus	90.41	89.55
HORVU5Hr1G103680.1	Barley	cytosol	90.17	89.31
KRH25334	Soybean	nucleus	87.77	87.77
VIT_06s0080g01230.t01	Wine grape	cytosol	87.53	87.53
KRG88903	Soybean	nucleus	87.29	87.29
Zm00001d006230_P001	Maize	cytosol	60.67	87.24
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	38.37	86.96
Zm00001d045645_P001	Maize	cytosol	55.4	86.84
KRH22611	Soybean	nucleus	86.81	86.81
KRH26709	Soybean	nucleus	86.33	86.33
VIT_13s0073g00560.t01	Wine grape	cytosol	85.37	85.58
Solyc04g009770.2.1	Tomato	nucleus	85.37	85.17
Zm00001d033210_P002	Maize	nucleus	84.89	84.49
PGSC0003DMT400065401	Potato	nucleus	84.65	84.25
AT3G44110.1	Thale cress	nucleus	82.97	82.38
CDX92386	Canola	nucleus	82.73	81.75
Bra002385.1-P	Field mustard	nucleus	82.73	81.75
Zm00001d006563_P001	Maize	mitochondrion	53.24	81.62
CDX92385	Canola	nucleus	82.49	81.52
Bra002386.1-P	Field mustard	nucleus	82.25	81.28
CDY65546	Canola	nucleus	82.01	81.24
CDY09117	Canola	nucleus	81.3	80.14
Bra020169.1-P	Field mustard	nucleus	80.82	79.67
Zm00001d013669_P002	Maize	cytosol	85.13	79.06
AT5G22060.1	Thale cress	cytosol	78.42	78.04
CDX88812	Canola	nucleus	75.06	76.72
Bra006608.1-P	Field mustard	nucleus	75.06	76.72
Zm00001d026185_P001	Maize	endoplasmic reticulum	90.65	75.15
CDX70980	Canola	nucleus	73.14	74.94
HORVU6Hr1G065410.3	Barley	cytosol, mitochondrion	52.04	74.32
Zm00001d004840_P001	Maize	mitochondrion	60.91	74.05
Zm00001d017476_P001	Maize	plasma membrane	73.62	72.75
CDY16617	Canola	nucleus	35.49	71.15
Zm00001d009783_P004	Maize	mitochondrion	32.37	38.57
Zm00001d009027_P001	Maize	cytosol	29.98	37.2
Zm00001d037586_P001	Maize	endoplasmic reticulum	32.61	37.06
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	31.18	37.04
Zm00001d039000_P001	Maize	mitochondrion	31.41	36.19
Zm00001d010958_P001	Maize	cytosol	27.58	35.28
Zm00001d016440_P001	Maize	cytosol	29.26	35.26
Zm00001d024527_P001	Maize	cytosol	28.54	34.2
Zm00001d032347_P001	Maize	cytosol	27.82	34.02
Zm00001d039259_P001	Maize	nucleus	29.5	28.54
Zm00001d009210_P001	Maize	endoplasmic reticulum	26.86	27.59
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	27.82	27.36
Zm00001d012242_P001	Maize	cytosol	20.62	27.22
Zm00001d035975_P001	Maize	mitochondrion	27.1	26.34
Zm00001d035974_P001	Maize	mitochondrion	27.1	26.34
Zm00001d038250_P001	Maize	cytosol	19.66	24.48
Zm00001d024635_P001	Maize	mitochondrion	27.34	23.12
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	27.34	23.03
Zm00001d023537_P002	Maize	mitochondrion	22.78	22.35
Zm00001d042653_P001	Maize	plastid	21.34	22.25
Zm00001d047195_P001	Maize	mitochondrion	17.03	21.52
Zm00001d018413_P003	Maize	mitochondrion	28.3	20.74
Zm00001d028256_P002	Maize	plastid	24.46	18.96
Zm00001d052001_P002	Maize	plastid	27.82	18.89
Zm00001d044878_P002	Maize	mitochondrion	19.42	16.53

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A1D6GG02	ProteinID:AQK62482.1
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43888	PANTHER:PTHR43888:SF15	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000221F9B5	EnsemblPlantsGene:Zm00001d013111	EnsemblPlants:Zm00001d013111_P001
EnsemblPlants:Zm00001d013111_T001	SEG:seg	:	:	:	:

Description

DnaJ protein

Coordinates

chr5:-:4796152..4799203

Molecular Weight (calculated)

46564.0 Da

IEP (calculated)

5.901

GRAVY (calculated)

-0.806

Length

417 amino acids

Sequence
(BLAST)

001: MFGRAPKKSD NTRYYEILGV SKDASQDDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE GMGGGGGMHD PFDIFQSFFG
101: GGSPFGGGSS RGRRQRRGDD VVHPLKVSLE DLYNGTSKKL SLSRNVLCSK CNGKGSKSGA SSRCAGCQGS GFKVQIRQLG PGMIQQMQHP CNECKGSGET
201: ISDKDRCPQC KGDKVVPEKK VLEVVVEKGM QNGQKITFPG EADEAPDTAT GDIIFVLQQK EHPKFKRKGD DLFYEHTLIL TESLCGFQFV LTHLDNRQLL
301: IKSNPGEVVK PDSFKAINDE GMPMYQRPFM KGKLYIHFSV EFPDSLSPEQ CKTLEAVLPL KPVSQYTDME LDECEETMPY DVNIEEEMRR RQQQHQEAYD
401: EDDDVPGGGQ RVQCAQQ

Best Arabidopsis Sequence Match ( AT3G44110.1 )
(BLAST)

001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ

Arabidopsis Description

ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.