Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17752 | Sorghum | endoplasmic reticulum, golgi | 96.57 | 96.57 |
| Zm00001d037586_P001 | Maize | endoplasmic reticulum | 92.86 | 88.56 |
| Os05t0156500-01 | Rice | cytosol, nucleus | 36.86 | 88.36 |
| TraesCS1D01G107200.1 | Wheat | nucleus | 88.29 | 88.29 |
| TraesCS1B01G125100.1 | Wheat | nucleus | 88.29 | 88.29 |
| TraesCS1A01G099300.1 | Wheat | nucleus | 88.29 | 88.29 |
| GSMUA_Achr8P33890_001 | Banana | endoplasmic reticulum | 78.29 | 79.65 |
| VIT_07s0005g01220.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 76.57 | 77.68 |
| PGSC0003DMT400023249 | Potato | endoplasmic reticulum, golgi | 75.71 | 76.81 |
| KRG96505 | Soybean | nucleus | 75.14 | 76.68 |
| KRH68242 | Soybean | endoplasmic reticulum | 74.86 | 76.38 |
| Solyc01g079610.2.1 | Tomato | nucleus | 75.14 | 76.23 |
| KRH69236 | Soybean | endoplasmic reticulum | 73.14 | 73.99 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 72.0 | 72.83 |
| CDX89142 | Canola | endoplasmic reticulum | 72.0 | 72.62 |
| CDY11430 | Canola | golgi | 71.71 | 72.54 |
| Bra007687.1-P | Field mustard | golgi | 71.71 | 72.54 |
| CDX76646 | Canola | golgi | 71.71 | 72.54 |
| CDY63310 | Canola | endoplasmic reticulum | 71.71 | 72.33 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 71.14 | 71.76 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 76.0 | 71.31 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 66.0 | 70.64 |
| HORVU1Hr1G022990.1 | Barley | cytosol | 84.57 | 69.65 |
| KRH55068 | Soybean | cytosol | 26.0 | 66.42 |
| Bra003501.1-P | Field mustard | nucleus | 67.14 | 63.34 |
| Zm00001d009210_P001 | Maize | endoplasmic reticulum | 62.0 | 53.45 |
| Bra014400.1-P | Field mustard | golgi | 70.57 | 36.98 |
| Zm00001d010958_P001 | Maize | cytosol | 32.57 | 34.97 |
| Zm00001d016440_P001 | Maize | cytosol | 34.0 | 34.39 |
| Zm00001d039000_P001 | Maize | mitochondrion | 34.86 | 33.7 |
| Zm00001d009556_P001 | Maize | cytoskeleton, cytosol, nucleus | 33.71 | 33.62 |
| Zm00001d033210_P002 | Maize | nucleus | 39.14 | 32.7 |
| Zm00001d009027_P001 | Maize | cytosol | 31.14 | 32.44 |
| Zm00001d013111_P001 | Maize | extracellular, plasma membrane | 38.57 | 32.37 |
| Zm00001d034368_P001 | Maize | extracellular, plasma membrane | 38.57 | 32.3 |
| Zm00001d024527_P001 | Maize | cytosol | 31.14 | 31.32 |
| Zm00001d032347_P001 | Maize | cytosol | 30.29 | 31.09 |
| Zm00001d013669_P002 | Maize | cytosol | 39.43 | 30.73 |
| Zm00001d017476_P001 | Maize | plasma membrane | 34.57 | 28.67 |
| Zm00001d048538_P001 | Maize | nucleus | 26.29 | 28.31 |
| Zm00001d031357_P001 | Maize | cytosol, nucleus, plastid | 14.57 | 27.72 |
| Zm00001d006666_P001 | Maize | nucleus | 22.0 | 26.28 |
| Zm00001d039259_P001 | Maize | nucleus | 32.29 | 26.22 |
| Zm00001d026185_P001 | Maize | endoplasmic reticulum | 36.57 | 25.45 |
| Zm00001d006563_P001 | Maize | mitochondrion | 19.43 | 25.0 |
| Zm00001d006230_P001 | Maize | cytosol | 20.57 | 24.83 |
| Zm00001d045645_P001 | Maize | cytosol | 18.29 | 24.06 |
| Zm00001d012242_P001 | Maize | cytosol | 21.43 | 23.73 |
| Zm00001d053972_P001 | Maize | cytosol, golgi, plasma membrane | 27.43 | 22.64 |
| Zm00001d035975_P001 | Maize | mitochondrion | 27.14 | 22.14 |
| Zm00001d035974_P001 | Maize | mitochondrion | 26.86 | 21.91 |
| Zm00001d038250_P001 | Maize | cytosol | 20.86 | 21.79 |
| Zm00001d023537_P002 | Maize | mitochondrion | 26.29 | 21.65 |
| Zm00001d004840_P001 | Maize | mitochondrion | 20.86 | 21.28 |
| Zm00001d049583_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 28.0 | 19.8 |
| Zm00001d024635_P001 | Maize | mitochondrion | 27.43 | 19.47 |
| Zm00001d042653_P001 | Maize | plastid | 21.43 | 18.75 |
| Zm00001d018413_P003 | Maize | mitochondrion | 27.71 | 17.05 |
| Zm00001d052001_P002 | Maize | plastid | 28.57 | 16.29 |
| Zm00001d028256_P002 | Maize | plastid | 24.29 | 15.8 |
| Zm00001d047195_P001 | Maize | mitochondrion | 14.29 | 15.15 |
| Zm00001d044878_P002 | Maize | mitochondrion | 19.71 | 14.08 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:103635449 | MapMan:19.1.1.2.1.2 | Gene3D:2.60.260.20 | ProteinID:AQK92698.1 | ncoils:Coil |
| InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | UniProt:K7UU30 | PFAM:PF00226 | PFAM:PF01556 | PRINTS:PR00625 |
| ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR43888 | PANTHER:PTHR43888:SF14 | SMART:SM00271 | SUPFAM:SSF46565 |
| SUPFAM:SSF49493 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000220B149 | EnsemblPlantsGene:Zm00001d009783 | EnsemblPlants:Zm00001d009783_P004 |
| EnsemblPlants:Zm00001d009783_T004 | SEG:seg | : | : | : | : |
Description
DnaJ protein ERDJ3B
Coordinates
chr8:-:80843464..80852093
Molecular Weight (calculated)
39219.0 Da
IEP (calculated)
7.571
GRAVY (calculated)
-0.565
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPGKGGAA RFAAALFVLL NLAVAIAGKS YYDVLQVPKG ASEDQIKRSY RKLALKYHPD KNPDNEEANK RFAEINNAYE VLTDQEKKKI YDRYGEEGLK
101: QFQGGRGSGG GMNIQDIFSS FFGGGGGGME EEEQQILKGD EVIVELDASL EDLYMGGSLK VWREKNVIKP APGKRRCNCR NEVYHRQIGP GMYQQMTEQV
201: CDQCPNVKFV REGEFLTVDI EKGMKDGQEV LFFEEGEPKI DGEPGDLKFR IRTALHSHFK REGNDLHATV TISLLQALVG FEKTIKHLDN HLVEIGTKGI
301: TKPKEIRKFK GEGMPLYQSN KKGDLYVTFE VLFPKTLTAD QKAKLKDVLV
101: QFQGGRGSGG GMNIQDIFSS FFGGGGGGME EEEQQILKGD EVIVELDASL EDLYMGGSLK VWREKNVIKP APGKRRCNCR NEVYHRQIGP GMYQQMTEQV
201: CDQCPNVKFV REGEFLTVDI EKGMKDGQEV LFFEEGEPKI DGEPGDLKFR IRTALHSHFK REGNDLHATV TISLLQALVG FEKTIKHLDN HLVEIGTKGI
301: TKPKEIRKFK GEGMPLYQSN KKGDLYVTFE VLFPKTLTAD QKAKLKDVLV
001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
Arabidopsis Description
ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.