Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59898 | Canola | endoplasmic reticulum, golgi | 94.5 | 89.05 |
| CDX89142 | Canola | endoplasmic reticulum | 92.66 | 87.32 |
| CDY11430 | Canola | golgi | 92.35 | 87.28 |
| CDX76646 | Canola | golgi | 92.05 | 86.99 |
| CDY63310 | Canola | endoplasmic reticulum | 92.05 | 86.74 |
| Bra003501.1-P | Field mustard | nucleus | 86.24 | 76.01 |
| VIT_07s0005g01220.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 77.98 | 73.91 |
| PGSC0003DMT400023249 | Potato | endoplasmic reticulum, golgi | 77.06 | 73.04 |
| Solyc01g079610.2.1 | Tomato | nucleus | 77.06 | 73.04 |
| TraesCS1B01G125100.1 | Wheat | nucleus | 74.01 | 69.14 |
| TraesCS1D01G107200.1 | Wheat | nucleus | 73.7 | 68.86 |
| TraesCS1A01G099300.1 | Wheat | nucleus | 73.09 | 68.29 |
| GSMUA_Achr8P33890_001 | Banana | endoplasmic reticulum | 71.56 | 68.02 |
| EES17752 | Sorghum | endoplasmic reticulum, golgi | 72.78 | 68.0 |
| Zm00001d009783_P004 | Maize | mitochondrion | 70.64 | 66.0 |
| Zm00001d037586_P001 | Maize | endoplasmic reticulum | 71.87 | 64.03 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 72.48 | 63.54 |
| KRH55068 | Soybean | cytosol | 26.3 | 62.77 |
| Os05t0156500-01 | Rice | cytosol, nucleus | 25.99 | 58.22 |
| KXG32445 | Sorghum | endoplasmic reticulum | 61.47 | 58.09 |
| HORVU1Hr1G022990.1 | Barley | cytosol | 71.56 | 55.06 |
| Zm00001d009210_P001 | Maize | endoplasmic reticulum | 55.66 | 44.83 |
| CDY58657 | Canola | cytosol | 35.47 | 35.58 |
| CDY64940 | Canola | nucleus | 35.47 | 35.37 |
| CDY07893 | Canola | cytosol | 34.86 | 35.29 |
| CDY27963 | Canola | cytosol | 35.17 | 34.95 |
| CDY35188 | Canola | cytosol | 34.25 | 34.57 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 35.17 | 34.43 |
| CDY20944 | Canola | cytosol | 31.8 | 34.1 |
| CDY22173 | Canola | cytosol | 34.86 | 33.93 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 33.03 | 33.64 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 32.42 | 33.33 |
| CDX88188 | Canola | cytosol | 32.42 | 33.02 |
| CDX80523 | Canola | cytosol | 32.42 | 33.02 |
| CDY65077 | Canola | cytosol | 33.33 | 32.44 |
| CDY54902 | Canola | cytosol | 33.03 | 32.43 |
| CDY05498 | Canola | cytosol | 33.03 | 32.43 |
| CDY13869 | Canola | cytosol | 33.33 | 32.25 |
| CDX97443 | Canola | cytosol | 29.66 | 32.23 |
| CDY20637 | Canola | cytosol | 31.5 | 32.19 |
| CDY38388 | Canola | cytosol | 33.64 | 32.16 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 32.72 | 31.75 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 31.5 | 31.12 |
| CDX83026 | Canola | cytosol | 31.19 | 31.1 |
| CDY37986 | Canola | cytosol | 22.02 | 30.51 |
| CDY36915 | Canola | cytosol | 30.89 | 30.24 |
| CDY65546 | Canola | nucleus | 37.92 | 29.45 |
| CDX68447 | Canola | cytosol | 30.89 | 29.45 |
| CDX92385 | Canola | nucleus | 37.61 | 29.15 |
| CDX92386 | Canola | nucleus | 37.61 | 29.15 |
| CDY09117 | Canola | nucleus | 37.31 | 28.84 |
| CDX88812 | Canola | nucleus | 35.78 | 28.68 |
| CDX70980 | Canola | nucleus | 35.17 | 28.26 |
| CDY21803 | Canola | nucleus | 29.05 | 28.11 |
| CDY24146 | Canola | cytosol | 30.89 | 26.79 |
| CDY16617 | Canola | nucleus | 13.46 | 21.15 |
| CDX89453 | Canola | plastid | 28.75 | 20.8 |
| CDY25588 | Canola | plastid | 28.75 | 20.7 |
| CDY45921 | Canola | mitochondrion | 28.13 | 20.58 |
| CDY35761 | Canola | mitochondrion | 27.83 | 20.36 |
| CDY54516 | Canola | mitochondrion | 26.91 | 19.43 |
| CDX87288 | Canola | plastid | 29.66 | 19.36 |
| CDY63891 | Canola | cytosol | 28.75 | 19.34 |
| CDX86330 | Canola | mitochondrion | 26.91 | 19.3 |
| CDY58774 | Canola | plastid | 29.36 | 19.2 |
| CDY66166 | Canola | plastid | 20.18 | 18.97 |
| CDY14974 | Canola | nucleus | 19.88 | 18.79 |
| CDX69371 | Canola | mitochondrion | 28.44 | 18.56 |
| CDX90134 | Canola | mitochondrion | 23.55 | 17.91 |
| CDX95817 | Canola | plastid | 24.46 | 15.9 |
| CDY35719 | Canola | mitochondrion | 23.85 | 15.69 |
| CDY20977 | Canola | nucleus | 19.27 | 15.63 |
| CDY20589 | Canola | nucleus | 18.65 | 15.52 |
| CDX92166 | Canola | plastid | 23.85 | 15.45 |
| CDX97927 | Canola | nucleus | 19.57 | 14.78 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 19.57 | 14.71 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.1.2.1.2 | Gene3D:2.60.260.20 | GO:A0A078BVT9 | EnsemblPlants:CDX67894 | ProteinID:CDX67894 |
| ProteinID:CDX67894.1 | ncoils:Coil | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00099099001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR43888 | PANTHER:PTHR43888:SF14 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | SignalP:SignalP-TM | UniParc:UPI0004EF403D | SEG:seg |
Description
BnaA07g19340D
Coordinates
chrLK031787:-:2785064..2787357
Molecular Weight (calculated)
36835.3 Da
IEP (calculated)
8.448
GRAVY (calculated)
-0.585
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIRWSELCI VLFALSYAIC VIAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNPG NDEATRKFAD INNAYEVLSD EEKREIYNKY GEEGLKQHAA
101: NGGRGGGGGM NMQDIFSQFF GGGGSTEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRDEVY HRQIGPGMFQ QMTEQVCDKC
201: PNTKKKCLST KMVNLFSDGE PGDLKFRIKT APHARFRRDG NDLHMTVNIT LVEALVGFEK SFKHLDEHEV DISSKGITKP KEVKKFKGEG MPLHFSTKKG
301: NLFVTFEVLF PSSLTEDQKK KIKEVLA
101: NGGRGGGGGM NMQDIFSQFF GGGGSTEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRDEVY HRQIGPGMFQ QMTEQVCDKC
201: PNTKKKCLST KMVNLFSDGE PGDLKFRIKT APHARFRRDG NDLHMTVNIT LVEALVGFEK SFKHLDEHEV DISSKGITKP KEVKKFKGEG MPLHFSTKKG
301: NLFVTFEVLF PSSLTEDQKK KIKEVLA
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
Arabidopsis Description
At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.