Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001337.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 99.7 | 99.7 |
| CDY07893 | Canola | cytosol | 94.91 | 98.14 |
| CDY22173 | Canola | cytosol | 95.21 | 94.64 |
| CDY58657 | Canola | cytosol | 92.22 | 94.48 |
| CDY64940 | Canola | nucleus | 91.62 | 93.29 |
| AT3G08910.1 | Thale cress | nucleus | 89.82 | 92.88 |
| CDY27963 | Canola | cytosol | 89.82 | 91.19 |
| KRG88624 | Soybean | nucleus | 81.74 | 81.01 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 81.74 | 80.77 |
| KRH65726 | Soybean | nucleus | 81.44 | 80.71 |
| PGSC0003DMT400059397 | Potato | cytosol | 81.44 | 80.0 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 81.44 | 80.0 |
| KRH75968 | Soybean | nucleus | 78.74 | 78.04 |
| CDY35188 | Canola | cytosol | 68.86 | 70.99 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 66.77 | 70.13 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 67.37 | 70.09 |
| CDY38388 | Canola | cytosol | 70.66 | 69.01 |
| CDX97443 | Canola | cytosol | 61.08 | 67.77 |
| CDY65077 | Canola | cytosol | 67.37 | 66.96 |
| CDY13869 | Canola | cytosol | 67.37 | 66.57 |
| Zm00001d010958_P001 | Maize | cytosol | 64.07 | 65.64 |
| EES17644 | Sorghum | cytosol | 61.08 | 65.18 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 60.48 | 59.59 |
| CDX80523 | Canola | cytosol | 56.29 | 58.57 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 60.18 | 58.43 |
| CDY20944 | Canola | cytosol | 53.29 | 58.36 |
| CDX88188 | Canola | cytosol | 55.99 | 58.26 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 60.48 | 58.21 |
| CDY37986 | Canola | cytosol | 41.02 | 58.05 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 57.48 | 58.01 |
| CDY05498 | Canola | cytosol | 56.89 | 57.06 |
| CDY54902 | Canola | cytosol | 56.59 | 56.76 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 57.19 | 56.68 |
| CDY36915 | Canola | cytosol | 56.59 | 56.59 |
| CDX83026 | Canola | cytosol | 55.09 | 56.1 |
| CDY20637 | Canola | cytosol | 53.59 | 55.94 |
| CDX68447 | Canola | cytosol | 55.39 | 53.94 |
| CDY21803 | Canola | nucleus | 54.49 | 53.85 |
| HORVU1Hr1G015040.2 | Barley | plastid | 59.88 | 52.22 |
| CDY24146 | Canola | cytosol | 57.19 | 50.66 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 66.77 | 50.45 |
| HORVU1Hr1G015060.2 | Barley | plastid | 32.93 | 38.6 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 34.43 | 35.17 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 36.53 | 35.16 |
| CDX89142 | Canola | endoplasmic reticulum | 36.23 | 34.87 |
| CDY63310 | Canola | endoplasmic reticulum | 36.23 | 34.87 |
| CDX76646 | Canola | golgi | 35.33 | 34.1 |
| CDY11430 | Canola | golgi | 35.33 | 34.1 |
| CDY66166 | Canola | plastid | 30.24 | 29.02 |
| CDY14974 | Canola | nucleus | 29.34 | 28.32 |
| CDY09117 | Canola | nucleus | 35.33 | 27.9 |
| CDY65546 | Canola | nucleus | 35.03 | 27.79 |
| CDX92385 | Canola | nucleus | 34.73 | 27.49 |
| CDX92386 | Canola | nucleus | 34.73 | 27.49 |
| CDX88812 | Canola | nucleus | 32.63 | 26.72 |
| CDX70980 | Canola | nucleus | 32.34 | 26.54 |
| CDY20977 | Canola | nucleus | 30.84 | 25.56 |
| CDY20589 | Canola | nucleus | 29.94 | 25.45 |
| CDX97927 | Canola | nucleus | 31.44 | 24.25 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 31.14 | 23.91 |
| CDY16617 | Canola | nucleus | 13.77 | 22.12 |
| CDX89453 | Canola | plastid | 27.84 | 20.58 |
| CDY25588 | Canola | plastid | 27.84 | 20.48 |
| CDY45921 | Canola | mitochondrion | 27.25 | 20.36 |
| CDY35761 | Canola | mitochondrion | 26.95 | 20.13 |
| CDY54516 | Canola | mitochondrion | 26.95 | 19.87 |
| CDX86330 | Canola | mitochondrion | 26.95 | 19.74 |
| CDY58774 | Canola | plastid | 29.04 | 19.4 |
| CDX87288 | Canola | plastid | 28.44 | 18.96 |
| CDY63891 | Canola | cytosol | 27.25 | 18.72 |
| CDX69371 | Canola | mitochondrion | 27.54 | 18.36 |
| CDX90134 | Canola | mitochondrion | 23.35 | 18.14 |
| CDX95817 | Canola | plastid | 25.75 | 17.1 |
| CDX92166 | Canola | plastid | 25.75 | 17.03 |
| CDY35719 | Canola | mitochondrion | 22.75 | 15.29 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078JQX0 | UniProt:A0A078JQX0 | EnsemblPlants:CDY68815 |
| ProteinID:CDY68815 | ProteinID:CDY68815.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00079905001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EDEF14 | SEG:seg | : |
Description
BnaAnng28460DBnaAnng28460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQX0]
Coordinates
chrLK038067:-:898..3268
Molecular Weight (calculated)
36939.8 Da
IEP (calculated)
9.784
GRAVY (calculated)
-0.634
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKVLQ VDRSAKDDDL KKAYRKLAMK WHPDKNPNTK KEAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLNSQAPP PGAGGFPGGS DGGASFRFNG
101: RSADDIFSEF FGFARPFGDT RGAGPSGGGF RFAEDVFSSY RSATGEASNA PPRKAAPIER QLPCSLEDLY KGITKKMKIS RDVLDSSWRP TTVEEILTIE
201: IKPGWKKGTK ITFPEKGNEQ RGIIPSDLVF IVDEKPHAVF KRDGNDLVIT QKIPLVEALT GYTAQVTTLD GRTLTVPVNN VISPTYEEVV KGEGMPIPKD
301: PSRKGNLRIK FNVKFPSRLT TEQKTGIKRM FSSA
101: RSADDIFSEF FGFARPFGDT RGAGPSGGGF RFAEDVFSSY RSATGEASNA PPRKAAPIER QLPCSLEDLY KGITKKMKIS RDVLDSSWRP TTVEEILTIE
201: IKPGWKKGTK ITFPEKGNEQ RGIIPSDLVF IVDEKPHAVF KRDGNDLVIT QKIPLVEALT GYTAQVTTLD GRTLTVPVNN VISPTYEEVV KGEGMPIPKD
301: PSRKGNLRIK FNVKFPSRLT TEQKTGIKRM FSSA
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
Arabidopsis Description
At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.