Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 94.07 | 95.77 |
| Bra027838.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 96.44 | 95.59 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 84.57 | 86.1 |
| CDY20944 | Canola | cytosol | 71.22 | 78.69 |
| CDY20637 | Canola | cytosol | 72.7 | 76.56 |
| CDY37986 | Canola | cytosol | 50.15 | 71.61 |
| Solyc05g006820.2.1 | Tomato | plastid | 59.94 | 64.95 |
| PGSC0003DMT400045398 | Potato | mitochondrion | 59.64 | 64.63 |
| PGSC0003DMT400007444 | Potato | cytosol | 58.75 | 63.87 |
| KRH69388 | Soybean | cytosol | 51.34 | 62.68 |
| Solyc04g005820.2.1 | Tomato | cytosol, nucleus | 59.05 | 62.19 |
| KRH74747 | Soybean | cytosol | 50.74 | 61.73 |
| VIT_01s0026g01450.t01 | Wine grape | cytosol | 48.96 | 60.44 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 57.57 | 60.44 |
| CDY35188 | Canola | cytosol | 57.57 | 59.88 |
| CDX83026 | Canola | cytosol | 58.16 | 59.76 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 56.08 | 59.43 |
| CDY36915 | Canola | cytosol | 58.75 | 59.28 |
| CDY13869 | Canola | cytosol | 59.05 | 58.88 |
| KRH45833 | Soybean | cytosol | 50.45 | 58.82 |
| CDY07893 | Canola | cytosol | 56.38 | 58.82 |
| CDY65077 | Canola | cytosol | 58.46 | 58.63 |
| CDX68447 | Canola | cytosol | 59.35 | 58.31 |
| KRG99186 | Soybean | cytosol | 49.85 | 58.13 |
| CDX88188 | Canola | cytosol | 55.19 | 57.94 |
| CDX80523 | Canola | cytosol | 55.19 | 57.94 |
| CDY64940 | Canola | nucleus | 56.08 | 57.62 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 56.68 | 57.19 |
| CDX97443 | Canola | cytosol | 51.04 | 57.14 |
| CDY58657 | Canola | cytosol | 54.9 | 56.75 |
| CDY38388 | Canola | cytosol | 57.57 | 56.73 |
| CDY27963 | Canola | cytosol | 55.19 | 56.53 |
| CDY54902 | Canola | cytosol | 55.49 | 56.16 |
| CDY05498 | Canola | cytosol | 55.49 | 56.16 |
| CDY22173 | Canola | cytosol | 55.49 | 55.65 |
| CDY21803 | Canola | nucleus | 55.79 | 55.62 |
| CDY24146 | Canola | cytosol | 58.16 | 51.99 |
| KRH60063 | Soybean | endoplasmic reticulum, golgi | 30.27 | 51.52 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 33.83 | 32.85 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 31.75 | 32.72 |
| CDY63310 | Canola | endoplasmic reticulum | 33.53 | 32.56 |
| CDX89142 | Canola | endoplasmic reticulum | 33.53 | 32.56 |
| CDX76646 | Canola | golgi | 33.23 | 32.37 |
| CDY11430 | Canola | golgi | 33.23 | 32.37 |
| CDX88812 | Canola | nucleus | 34.12 | 28.19 |
| CDY65546 | Canola | nucleus | 35.01 | 28.03 |
| CDY09117 | Canola | nucleus | 35.01 | 27.9 |
| CDX92386 | Canola | nucleus | 34.72 | 27.73 |
| CDX92385 | Canola | nucleus | 34.72 | 27.73 |
| CDX70980 | Canola | nucleus | 33.23 | 27.52 |
| CDY66166 | Canola | plastid | 27.89 | 27.01 |
| CDY14974 | Canola | nucleus | 27.3 | 26.59 |
| CDY16617 | Canola | nucleus | 15.73 | 25.48 |
| CDY20589 | Canola | nucleus | 29.67 | 25.45 |
| CDY20977 | Canola | nucleus | 30.27 | 25.31 |
| CDX97927 | Canola | nucleus | 30.27 | 23.56 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 29.97 | 23.22 |
| CDY58774 | Canola | plastid | 29.97 | 20.2 |
| CDX89453 | Canola | plastid | 27.0 | 20.13 |
| CDY25588 | Canola | plastid | 27.0 | 20.04 |
| CDX87288 | Canola | plastid | 29.67 | 19.96 |
| CDY35761 | Canola | mitochondrion | 25.22 | 19.02 |
| CDX90134 | Canola | mitochondrion | 24.04 | 18.84 |
| CDY45921 | Canola | mitochondrion | 24.93 | 18.79 |
| CDY54516 | Canola | mitochondrion | 24.63 | 18.32 |
| CDX86330 | Canola | mitochondrion | 24.63 | 18.2 |
| CDY63891 | Canola | cytosol | 25.82 | 17.9 |
| CDX69371 | Canola | mitochondrion | 25.82 | 17.37 |
| CDX95817 | Canola | plastid | 25.82 | 17.3 |
| CDX92166 | Canola | plastid | 25.52 | 17.03 |
| CDY35719 | Canola | mitochondrion | 23.44 | 15.9 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078GWN6 | UniProt:A0A078GWN6 | EnsemblPlants:CDY30900 |
| ProteinID:CDY30900 | ProteinID:CDY30900.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00046415001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF175 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EE6235 | SEG:seg | : |
Description
BnaC09g15060DBnaC09g15060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWN6]
Coordinates
chrLK032263:+:246469..248115
Molecular Weight (calculated)
37346.2 Da
IEP (calculated)
9.112
GRAVY (calculated)
-0.680
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYNVLN VPPSASEDDL KKSYRRLAMK WHPDKNPSSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EDGLKSSDLP TPATQRSYSS SNNNNEFRYY
101: PRDAEDIFNE FFGASGDAFG GGGRWESGNG GGSRFRSAEA GSQTSRKATA NRKAPAIESK LACTLEELYK GGRRKMRISR VVPDGLGKPK TVEEILKIDI
201: TPGWKKGTKI TFPEKGNHEP GVTPADLIFV IDEKPHSVYK RDGNDLIVDK KVSLLEALTG ITISLTTLDG RNLTIPVLDI VKPGQEIVIP NEGMPISKEV
301: SKRGDLRINF DICFPSRLTL EQKTDLKRVL GGAAVDN
101: PRDAEDIFNE FFGASGDAFG GGGRWESGNG GGSRFRSAEA GSQTSRKATA NRKAPAIESK LACTLEELYK GGRRKMRISR VVPDGLGKPK TVEEILKIDI
201: TPGWKKGTKI TFPEKGNHEP GVTPADLIFV IDEKPHSVYK RDGNDLIVDK KVSLLEALTG ITISLTTLDG RNLTIPVLDI VKPGQEIVIP NEGMPISKEV
301: SKRGDLRINF DICFPSRLTL EQKTDLKRVL GGAAVDN
001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.