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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87288 Canola plastid 97.0 96.81
AT1G80030.2 Thale cress plastid 86.0 86.0
VIT_09s0002g07210.t01 Wine grape plastid 71.0 72.6
KRH09715 Soybean nucleus, plastid 68.0 68.97
Solyc03g116790.2.1 Tomato plastid 68.6 68.88
KRH44477 Soybean plastid 57.8 65.09
KRH23590 Soybean nucleus 46.2 64.71
GSMUA_Achr11P... Banana plastid 63.0 64.29
Os02t0804500-01 Rice plastid 62.6 64.27
TraesCS6A01G372700.1 Wheat plastid 62.6 64.14
TraesCS6D01G356800.1 Wheat plastid 62.2 63.99
TraesCS6B01G410600.1 Wheat plastid 62.6 63.49
KXG31305 Sorghum plastid 61.0 61.37
HORVU0Hr1G017450.8 Barley cytosol 57.8 59.71
Zm00001d018413_P003 Maize mitochondrion 60.8 53.43
Zm00001d052001_P002 Maize plastid 59.4 48.37
CDX89453 Canola plastid 41.6 46.02
CDY25588 Canola plastid 41.4 45.59
CDY63891 Canola cytosol 40.2 41.36
CDX69371 Canola mitochondrion 40.4 40.32
CDX95817 Canola plastid 39.2 38.97
CDX92166 Canola plastid 39.2 38.81
CDX97443 Canola cytosol 19.2 31.89
CDY20944 Canola cytosol 19.2 31.48
CDY45921 Canola mitochondrion 28.0 31.32
CDY35761 Canola mitochondrion 28.0 31.32
CDY20637 Canola cytosol 19.6 30.62
CDY35188 Canola cytosol 19.8 30.56
CDY29908 Canola cytoskeleton, cytosol, nucleus 19.6 30.53
CDY37986 Canola cytosol 14.4 30.51
CDY05498 Canola cytosol 20.2 30.33
CDY54902 Canola cytosol 20.2 30.33
CDY54516 Canola mitochondrion 27.4 30.24
CDY65077 Canola cytosol 20.2 30.06
CDY30900 Canola cytoskeleton, cytosol, nucleus 20.2 29.97
CDY45143 Canola cytoskeleton, cytosol, nucleus 19.8 29.91
CDX92876 Canola cytoskeleton, cytosol, nucleus 19.0 29.87
CDX86330 Canola mitochondrion 27.0 29.61
CDY13869 Canola cytosol 20.0 29.59
CDY11430 Canola golgi 20.4 29.48
CDX76646 Canola golgi 20.4 29.48
CDX67894 Canola endoplasmic reticulum, golgi 19.2 29.36
CDX89142 Canola endoplasmic reticulum 20.2 29.11
CDY59898 Canola endoplasmic reticulum, golgi 20.2 29.11
CDY63310 Canola endoplasmic reticulum 20.2 29.11
CDY68815 Canola cytoskeleton, cytosol, nucleus 19.4 29.04
CDX80523 Canola cytosol 18.6 28.97
CDX88188 Canola cytosol 18.6 28.97
CDY07893 Canola cytosol 18.6 28.79
CDY36915 Canola cytosol 19.2 28.74
CDY38388 Canola cytosol 19.6 28.66
CDY58657 Canola cytosol 18.6 28.53
CDX83026 Canola cytosol 18.4 28.05
CDY64940 Canola nucleus 18.4 28.05
CDY22173 Canola cytosol 18.8 27.98
CDX68447 Canola cytosol 19.0 27.7
CDY27963 Canola cytosol 18.2 27.66
CDX90134 Canola mitochondrion 23.6 27.44
CDY21803 Canola nucleus 18.0 26.63
CDY65546 Canola nucleus 22.0 26.13
CDX92386 Canola nucleus 22.0 26.07
CDX92385 Canola nucleus 21.8 25.83
CDY09117 Canola nucleus 21.8 25.77
CDX70980 Canola nucleus 20.8 25.55
CDY24146 Canola cytosol 19.2 25.46
CDX88812 Canola nucleus 20.2 24.75
CDY35719 Canola mitochondrion 22.8 22.94
CDY66166 Canola plastid 11.2 16.09
CDY14974 Canola nucleus 11.0 15.9
CDY20589 Canola nucleus 11.2 14.25
CDY20977 Canola nucleus 11.4 14.14
CDY16617 Canola nucleus 5.8 13.94
CDX97927 Canola nucleus 11.0 12.7
CDY67277 Canola cytosol, nucleus, plastid 11.0 12.64
Protein Annotations
Gene3D:1.10.287.110MapMan:19.1.4.2Gene3D:2.10.230.10Gene3D:2.60.260.20GO:A0A078J6U3UniProt:A0A078J6U3
EnsemblPlants:CDY58774ProteinID:CDY58774ProteinID:CDY58774.1InterPro:DnaJInterPro:DnaJ_CInterPro:DnaJ_domain
InterPro:DnaJ_domain_CSGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009408GO:GO:0009628GO:GO:0009987
GO:GO:0031072GO:GO:0046872GO:GO:0051082EnsemblPlantsGene:GSBRNA2T00025129001InterPro:HSP40/DnaJ_pept-bdInterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sfInterPro:IPR001305InterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sfHAMAP:MF_01152
PFAM:PF00226PFAM:PF00684PFAM:PF01556PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076
PFscan:PS51188PANTHER:PTHR43096PANTHER:PTHR43096:SF22SMART:SM00271SUPFAM:SSF46565SUPFAM:SSF49493
SUPFAM:SSF57938TIGRFAMs:TIGR02349UniParc:UPI0004EC08AFSEG:seg::
Description
BnaCnng33760DBnaCnng33760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6U3]
Coordinates
chrLK033698:+:22799..26132
Molecular Weight (calculated)
53709.4 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.428
Length
500 amino acids
Sequence
(BLAST)
001: MAAALGSPSL IPSSLCFSGD GPPSLSSSSS LSFSVGGTNH KRSFLSVSSS PYRRRGIYRG RRSVVVVCAA SGDYYATLGV RKSANIKEIK SAYRRLARQY
101: HPDVNKEPGA TDKFKEISAA YEVLSDDQKR ALYDQYGEAG LKSSVGGGPS ATYTTNPFDL FETFFGASMG GFPGMDQADF GTTSRRSRVS KGDDLRYDIT
201: LQLSEAIFGS EKEFDLTHLE TCEACAGTGA KPGSKMRICS TCGGRGQVMR TEQTPFGLFS QVSVCPNCGG DGEIISENCR KCSGEGRVRI KKSIKVKIPP
301: GVTAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIKR DGINLLSTLS ITYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GAPKLNRPSI
401: RGDHLFTVKV TIPNQISAGE RELLEELASL SDTSSNRLRT RAKPQQSTTL NSAPISSENR TDEVREKSQE PEQENDLWKN IKDFAGSVAN GALKWLRDNL
Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)
001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL
Arabidopsis Description
Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.