Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001337.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 98.45 | 95.21 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 98.14 | 94.91 |
| CDY22173 | Canola | cytosol | 93.5 | 89.88 |
| CDY58657 | Canola | cytosol | 90.71 | 89.88 |
| CDY64940 | Canola | nucleus | 90.71 | 89.33 |
| AT3G08910.1 | Thale cress | nucleus | 88.24 | 88.24 |
| CDY27963 | Canola | cytosol | 89.78 | 88.15 |
| KRG88624 | Soybean | nucleus | 81.11 | 77.74 |
| KRH65726 | Soybean | nucleus | 80.81 | 77.45 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 80.5 | 76.92 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 80.5 | 76.47 |
| PGSC0003DMT400059397 | Potato | cytosol | 80.5 | 76.47 |
| KRH75968 | Soybean | nucleus | 78.02 | 74.78 |
| CDY35188 | Canola | cytosol | 69.97 | 69.75 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 67.8 | 68.87 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 68.42 | 68.85 |
| CDY38388 | Canola | cytosol | 70.59 | 66.67 |
| CDX97443 | Canola | cytosol | 60.99 | 65.45 |
| Zm00001d010958_P001 | Maize | cytosol | 65.63 | 65.03 |
| CDY65077 | Canola | cytosol | 67.49 | 64.88 |
| CDY13869 | Canola | cytosol | 67.49 | 64.5 |
| EES17644 | Sorghum | cytosol | 61.92 | 63.9 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 61.3 | 58.41 |
| CDY37986 | Canola | cytosol | 42.41 | 58.05 |
| CDY20944 | Canola | cytosol | 54.8 | 58.03 |
| CDX80523 | Canola | cytosol | 57.59 | 57.94 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 59.13 | 57.7 |
| CDX88188 | Canola | cytosol | 57.28 | 57.63 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 60.99 | 57.27 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 61.3 | 57.06 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 58.82 | 56.38 |
| CDY20637 | Canola | cytosol | 55.11 | 55.62 |
| CDY05498 | Canola | cytosol | 57.28 | 55.56 |
| CDY36915 | Canola | cytosol | 57.28 | 55.39 |
| CDY54902 | Canola | cytosol | 56.97 | 55.26 |
| CDX83026 | Canola | cytosol | 55.42 | 54.57 |
| CDY21803 | Canola | nucleus | 55.73 | 53.25 |
| CDX68447 | Canola | cytosol | 55.73 | 52.48 |
| HORVU1Hr1G015040.2 | Barley | plastid | 60.68 | 51.17 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 67.8 | 49.55 |
| CDY24146 | Canola | cytosol | 57.59 | 49.34 |
| HORVU1Hr1G015060.2 | Barley | plastid | 32.82 | 37.19 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 37.46 | 34.87 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 35.29 | 34.86 |
| CDX89142 | Canola | endoplasmic reticulum | 37.15 | 34.58 |
| CDY63310 | Canola | endoplasmic reticulum | 37.15 | 34.58 |
| CDX76646 | Canola | golgi | 36.22 | 33.81 |
| CDY11430 | Canola | golgi | 36.22 | 33.81 |
| CDY66166 | Canola | plastid | 30.03 | 27.87 |
| CDY14974 | Canola | nucleus | 29.1 | 27.17 |
| CDY09117 | Canola | nucleus | 35.29 | 26.95 |
| CDY65546 | Canola | nucleus | 34.98 | 26.84 |
| CDX92386 | Canola | nucleus | 34.67 | 26.54 |
| CDX92385 | Canola | nucleus | 34.67 | 26.54 |
| CDX88812 | Canola | nucleus | 33.13 | 26.23 |
| CDX70980 | Canola | nucleus | 32.82 | 26.04 |
| CDY20977 | Canola | nucleus | 30.96 | 24.81 |
| CDY20589 | Canola | nucleus | 30.03 | 24.68 |
| CDX97927 | Canola | nucleus | 31.58 | 23.56 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 31.27 | 23.22 |
| CDY16617 | Canola | nucleus | 14.24 | 22.12 |
| CDX89453 | Canola | plastid | 28.48 | 20.35 |
| CDY25588 | Canola | plastid | 28.48 | 20.26 |
| CDY45921 | Canola | mitochondrion | 27.24 | 19.69 |
| CDY35761 | Canola | mitochondrion | 26.93 | 19.46 |
| CDY54516 | Canola | mitochondrion | 27.24 | 19.43 |
| CDX86330 | Canola | mitochondrion | 27.24 | 19.3 |
| CDY58774 | Canola | plastid | 28.79 | 18.6 |
| CDX87288 | Canola | plastid | 28.17 | 18.16 |
| CDY63891 | Canola | cytosol | 27.24 | 18.11 |
| CDX69371 | Canola | mitochondrion | 27.55 | 17.76 |
| CDX90134 | Canola | mitochondrion | 23.22 | 17.44 |
| CDX95817 | Canola | plastid | 26.93 | 17.3 |
| CDX92166 | Canola | plastid | 26.93 | 17.23 |
| CDY35719 | Canola | mitochondrion | 22.6 | 14.69 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078F819 | UniProt:A0A078F819 | EnsemblPlants:CDY07893 |
| ProteinID:CDY07893 | ProteinID:CDY07893.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00125087001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EE42DA | SEG:seg | : |
Description
BnaC03g36300DBnaC03g36300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F819]
Coordinates
chrLK031982:-:959..3204
Molecular Weight (calculated)
35592.2 Da
IEP (calculated)
9.822
GRAVY (calculated)
-0.662
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKVLQ VDRSAKDDDL KKAYRKLAMK WHPDKNPNTK KEAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLNSQAPP PASGGFPGGS DGGASFRFNG
101: RSADDIFSEF FGFARPFGDT RGSGPSGGGS ATGGEASNAP PRKAAPIERQ LPCNLEDLYK GITRKMKISR DVLDSSWRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVITQ KIPLVEALTG YTAQVTTLDG RTLTVPVNNV ISPTYEEVVK GEGMPIPKDP SRKGNLRIKF
301: NVKFPSRLTT EQKTGIKRMF SSA
101: RSADDIFSEF FGFARPFGDT RGSGPSGGGS ATGGEASNAP PRKAAPIERQ LPCNLEDLYK GITRKMKISR DVLDSSWRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVITQ KIPLVEALTG YTAQVTTLDG RTLTVPVNNV ISPTYEEVVK GEGMPIPKDP SRKGNLRIKF
301: NVKFPSRLTT EQKTGIKRMF SSA
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
Arabidopsis Description
At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.