Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58657 | Canola | cytosol | 94.94 | 97.85 |
| Bra040063.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 93.45 | 96.32 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 94.64 | 95.21 |
| CDY07893 | Canola | cytosol | 89.88 | 93.5 |
| CDY64940 | Canola | nucleus | 89.88 | 92.07 |
| AT3G08910.1 | Thale cress | nucleus | 88.39 | 91.95 |
| CDY27963 | Canola | cytosol | 88.39 | 90.27 |
| KRG88624 | Soybean | nucleus | 81.55 | 81.31 |
| KRH65726 | Soybean | nucleus | 81.25 | 81.01 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 80.36 | 79.88 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 80.06 | 79.12 |
| PGSC0003DMT400059397 | Potato | cytosol | 80.06 | 79.12 |
| KRH75968 | Soybean | nucleus | 78.87 | 78.64 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 66.67 | 70.44 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 67.26 | 70.41 |
| CDY35188 | Canola | cytosol | 67.86 | 70.37 |
| CDY38388 | Canola | cytosol | 69.35 | 68.13 |
| CDX97443 | Canola | cytosol | 60.42 | 67.44 |
| CDY65077 | Canola | cytosol | 66.96 | 66.96 |
| CDY13869 | Canola | cytosol | 66.67 | 66.27 |
| EES17644 | Sorghum | cytosol | 58.93 | 63.26 |
| Zm00001d010958_P001 | Maize | cytosol | 61.31 | 63.19 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 59.52 | 59.0 |
| CDY20944 | Canola | cytosol | 52.98 | 58.36 |
| CDX80523 | Canola | cytosol | 55.36 | 57.94 |
| CDX88188 | Canola | cytosol | 55.36 | 57.94 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 59.23 | 57.85 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 59.52 | 57.64 |
| CDY37986 | Canola | cytosol | 40.48 | 57.63 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 55.95 | 56.8 |
| CDY05498 | Canola | cytosol | 55.95 | 56.46 |
| CDY36915 | Canola | cytosol | 55.95 | 56.29 |
| CDY54902 | Canola | cytosol | 55.65 | 56.16 |
| CDY20637 | Canola | cytosol | 53.27 | 55.94 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 55.65 | 55.49 |
| CDX83026 | Canola | cytosol | 54.17 | 55.49 |
| CDX68447 | Canola | cytosol | 54.76 | 53.64 |
| CDY21803 | Canola | nucleus | 53.27 | 52.96 |
| HORVU1Hr1G015040.2 | Barley | plastid | 58.93 | 51.7 |
| CDY24146 | Canola | cytosol | 56.55 | 50.4 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 65.77 | 50.0 |
| HORVU1Hr1G015060.2 | Barley | plastid | 31.85 | 37.54 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 36.01 | 34.87 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 33.93 | 34.86 |
| CDX89142 | Canola | endoplasmic reticulum | 35.71 | 34.58 |
| CDY63310 | Canola | endoplasmic reticulum | 35.71 | 34.58 |
| CDY11430 | Canola | golgi | 34.82 | 33.81 |
| CDX76646 | Canola | golgi | 34.82 | 33.81 |
| CDY66166 | Canola | plastid | 30.06 | 29.02 |
| CDY14974 | Canola | nucleus | 29.17 | 28.32 |
| CDY65546 | Canola | nucleus | 35.12 | 28.03 |
| CDY09117 | Canola | nucleus | 35.12 | 27.9 |
| CDX92386 | Canola | nucleus | 34.82 | 27.73 |
| CDX92385 | Canola | nucleus | 34.82 | 27.73 |
| CDX88812 | Canola | nucleus | 32.74 | 26.96 |
| CDX70980 | Canola | nucleus | 32.44 | 26.78 |
| CDY20589 | Canola | nucleus | 29.76 | 25.45 |
| CDY20977 | Canola | nucleus | 30.06 | 25.06 |
| CDX97927 | Canola | nucleus | 30.95 | 24.02 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 30.65 | 23.68 |
| CDY16617 | Canola | nucleus | 13.69 | 22.12 |
| CDX89453 | Canola | plastid | 26.79 | 19.91 |
| CDY45921 | Canola | mitochondrion | 26.49 | 19.91 |
| CDY54516 | Canola | mitochondrion | 26.79 | 19.87 |
| CDY25588 | Canola | plastid | 26.79 | 19.82 |
| CDX86330 | Canola | mitochondrion | 26.79 | 19.74 |
| CDY35761 | Canola | mitochondrion | 26.19 | 19.69 |
| CDY58774 | Canola | plastid | 27.98 | 18.8 |
| CDX87288 | Canola | plastid | 27.68 | 18.56 |
| CDY63891 | Canola | cytosol | 26.49 | 18.31 |
| CDX69371 | Canola | mitochondrion | 26.79 | 17.96 |
| CDX90134 | Canola | mitochondrion | 22.32 | 17.44 |
| CDX95817 | Canola | plastid | 25.6 | 17.1 |
| CDX92166 | Canola | plastid | 25.6 | 17.03 |
| CDY35719 | Canola | mitochondrion | 22.32 | 15.09 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078GBV4 | UniProt:A0A078GBV4 | EnsemblPlants:CDY22173 |
| ProteinID:CDY22173 | ProteinID:CDY22173.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00018579001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EE5CC0 | SEG:seg | : |
Description
BnaC01g39280DBnaC01g39280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBV4]
Coordinates
chrLK032128:-:348827..350984
Molecular Weight (calculated)
37344.4 Da
IEP (calculated)
9.863
GRAVY (calculated)
-0.686
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKLLQ VDRSAKDEDL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLNRQAPP PGPGGFPGGS DRGASFRFNG
101: RSADDIFSEF FGFSRPFNGD PRGAGPPGGG FRFAEDVFSS YRSAAGETSN AAPPRKAAPI ERQLPCSLED LYKGITKKMK ISRDVLDSSW RPTTVEEILT
201: IEIKPGWKKG TKITFPEKGN EQRGIIPSDL VFIVDEKPHA VFKRDGNDLV ITQKIPLVEA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP
301: KDPSKKGNLR IKFNVKFPSR VTTEQKSGIK RMFSSC
101: RSADDIFSEF FGFSRPFNGD PRGAGPPGGG FRFAEDVFSS YRSAAGETSN AAPPRKAAPI ERQLPCSLED LYKGITKKMK ISRDVLDSSW RPTTVEEILT
201: IEIKPGWKKG TKITFPEKGN EQRGIIPSDL VFIVDEKPHA VFKRDGNDLV ITQKIPLVEA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP
301: KDPSKKGNLR IKFNVKFPSR VTTEQKSGIK RMFSSC
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
Arabidopsis Description
At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.