CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035974_P001	Maize	mitochondrion	89.89	91.14
Zm00001d035975_P001	Maize	mitochondrion	88.97	90.21
Os06t0116800-01	Rice	mitochondrion	82.3	81.0
TraesCS7A01G051000.1	Wheat	mitochondrion	78.62	77.9
TraesCS7D01G045900.2	Wheat	mitochondrion	71.03	77.44
HORVU7Hr1G009230.8	Barley	plastid	75.86	74.16
GSMUA_Achr4P11580_001	Banana	mitochondrion	71.26	68.58
GSMUA_Achr3P00410_001	Banana	mitochondrion	68.74	66.44
VIT_13s0064g01360.t01	Wine grape	mitochondrion	64.83	62.53
KRH27511	Soybean	mitochondrion	60.46	59.37
EES15725	Sorghum	mitochondrion, plastid	56.78	58.95
KRH36456	Soybean	mitochondrion	60.0	58.92
Solyc01g086740.2.1	Tomato	mitochondrion	59.77	58.69
KRH43470	Soybean	mitochondrion	59.77	58.56
PGSC0003DMT400064990	Potato	mitochondrion	59.31	58.24
KRH13903	Soybean	mitochondrion	59.08	57.88
Bra020721.1-P	Field mustard	mitochondrion	57.7	56.15
CDY35761	Canola	mitochondrion	57.7	56.15
CDY45921	Canola	mitochondrion	57.7	56.15
Bra037514.1-P	Field mustard	mitochondrion	57.93	55.75
AT5G48030.1	Thale cress	mitochondrion	58.39	55.7
CDX86330	Canola	mitochondrion	58.39	55.7
CDY54516	Canola	mitochondrion	57.93	55.63
GSMUA_Achr4P12400_001	Banana	mitochondrion	58.85	54.7
KXG19604	Sorghum	mitochondrion	37.93	35.48
EES13204	Sorghum	plastid	35.4	34.38
KXG31305	Sorghum	plastid	32.18	28.17
EES14600	Sorghum	cytosol	21.84	27.7
KXG32445	Sorghum	endoplasmic reticulum	21.84	27.46
EES17752	Sorghum	endoplasmic reticulum, golgi	22.07	27.43
EES19943	Sorghum	cytosol	22.76	27.35
KXG37403	Sorghum	cytosol	25.52	26.55
EER93745	Sorghum	nucleus	24.83	25.78
EES17644	Sorghum	cytosol	18.39	25.56
EES02163	Sorghum	cytosol	19.77	25.52
EES07516	Sorghum	nucleus	24.6	25.48
OQU82085	Sorghum	nucleus	24.37	25.36
KXG29372	Sorghum	cytosol	19.54	25.15
OQU92981	Sorghum	plastid	29.43	23.75
EES13688	Sorghum	cytosol	18.62	22.82
EES01846	Sorghum	cytosol	15.17	20.06
EES19566	Sorghum	cytosol	14.94	19.12

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:8066921	UniProt:C5Z2V5
ncoils:Coil	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlants:EER89093
ProteinID:EER89093	ProteinID:EER89093.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0000740	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006457	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008219	GO:GO:0009408	GO:GO:0009553	GO:GO:0009558	GO:GO:0009628	GO:GO:0009653
GO:GO:0009856	GO:GO:0009987	GO:GO:0010197	GO:GO:0010198	GO:GO:0016043	GO:GO:0030154
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	GO:GO:0051085	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	EnsemblPlantsGene:SORBI_3010G014100	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	unigene:Sbi.1465	UniParc:UPI0001A899FB	RefSeq:XP_002437726.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:1163883..1170626

Molecular Weight (calculated)

46916.4 Da

IEP (calculated)

9.394

GRAVY (calculated)

-0.554

Length

435 amino acids

Sequence
(BLAST)

001: MRLPAGARLA LLLARRSLSS SASSSSRLPR AHRGIWSDAA RVVPSRSSPF SSPSSAHRFF HGTRPVAARD YYDVLGVSKN ASQSDIKKAY YGLAKKLHPD
101: TNKGDADAER KFQEVQRAYE TLKDEQKRSL YDQVGPDQYE KAASGGGGTG FEGGFGNPFE DIFSGGGGSG GMNDFFRNIF RDRDFGGRDV KVALELSFME
201: AVQGCSKTIN YQTSVKCETC GGAGVPPGTK PETCPSCRGS GFMFMQTGPF RMQSTCTKCG GSGKTVKEFC KTCRGNKVVP GTKSVHLDIL AGSDNEDTIK
301: VVRSGGEDPD GRPGDLYVTL KVREDPVFRR EKGDIHVDAV LNVTQAILGG TVQVPTLSGD VVLKVKPGTQ PGQKVVLRGK GIKARNSPYY GDQYVHFNVT
401: IPMNLTPRQR VLIEEFAKEE QGEDEKDAKA AGASG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.