Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G016170.1 | Barley | cytosol | 98.25 | 99.7 |
| TraesCS6B01G115000.1 | Wheat | cytosol | 95.91 | 97.33 |
| TraesCSU01G019500.1 | Wheat | nucleus | 95.32 | 96.74 |
| TraesCS6A01G087000.1 | Wheat | cytosol | 94.74 | 96.14 |
| KXG29372 | Sorghum | cytosol | 83.33 | 84.32 |
| Os02t0128400-01 | Rice | cytosol | 81.29 | 82.01 |
| Zm00001d053972_P001 | Maize | cytosol, golgi, plasma membrane | 82.16 | 66.27 |
| GSMUA_Achr4P12330_001 | Banana | nucleus | 55.85 | 58.23 |
| GSMUA_Achr9P23300_001 | Banana | cytosol | 55.85 | 55.52 |
| HORVU7Hr1G070170.1 | Barley | cytosol | 54.09 | 53.47 |
| KRH52529 | Soybean | cytosol | 50.58 | 53.07 |
| Bra009848.1-P | Field mustard | cytosol | 48.83 | 52.85 |
| CDX80523 | Canola | cytosol | 49.42 | 52.65 |
| CDX88188 | Canola | cytosol | 49.12 | 52.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.42 | 52.32 |
| KRH61857 | Soybean | cytosol, nucleus | 17.54 | 51.72 |
| KRH61858 | Soybean | cytosol | 21.34 | 51.41 |
| CDY54902 | Canola | cytosol | 50.0 | 51.35 |
| CDY05498 | Canola | cytosol | 50.0 | 51.35 |
| Bra020505.1-P | Field mustard | cytosol | 50.0 | 51.35 |
| PGSC0003DMT400083824 | Potato | cytosol | 47.95 | 50.62 |
| AT5G25530.1 | Thale cress | cytosol | 50.88 | 50.14 |
| VIT_04s0008g04300.t01 | Wine grape | cytosol | 49.42 | 49.85 |
| HORVU1Hr1G087070.1 | Barley | cytosol | 48.54 | 44.99 |
| HORVU3Hr1G032480.1 | Barley | cytosol, nucleus | 49.12 | 39.07 |
| HORVU3Hr1G113710.2 | Barley | plastid | 36.55 | 36.87 |
| HORVU1Hr1G015040.2 | Barley | plastid | 40.06 | 35.77 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 32.75 | 34.57 |
| HORVU1Hr1G015060.2 | Barley | plastid | 24.27 | 29.12 |
| HORVU5Hr1G103680.1 | Barley | cytosol | 33.33 | 27.08 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 17.84 | 26.29 |
| HORVU5Hr1G092610.3 | Barley | nucleus | 30.99 | 25.12 |
| HORVU1Hr1G022990.1 | Barley | cytosol | 29.24 | 23.53 |
| HORVU0Hr1G016360.1 | Barley | cytosol | 11.4 | 22.03 |
| HORVU0Hr1G018300.1 | Barley | plastid | 30.41 | 21.49 |
| HORVU6Hr1G065410.3 | Barley | cytosol, mitochondrion | 16.67 | 19.52 |
| HORVU0Hr1G000620.4 | Barley | plastid | 21.93 | 18.99 |
| HORVU5Hr1G036400.3 | Barley | plastid | 23.1 | 18.5 |
| HORVU7Hr1G009230.8 | Barley | plastid | 23.68 | 18.2 |
| HORVU0Hr1G017450.8 | Barley | cytosol | 25.44 | 17.98 |
| HORVU5Hr1G037600.2 | Barley | cytosol, nucleus | 28.07 | 16.47 |
| HORVU4Hr1G066920.5 | Barley | mitochondrion | 25.15 | 15.14 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | UniProt:A0A287TF40 | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051082 | EnsemblPlantsGene:HORVU6Hr1G016080 | EnsemblPlants:HORVU6Hr1G016080.3 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 |
| PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF363 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 |
| UniParc:UPI000B460954 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:35978488..35982645
Molecular Weight (calculated)
38297.3 Da
IEP (calculated)
9.482
GRAVY (calculated)
-0.792
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYYNILKVN RNASLEDLKK SYRRLARTWH PDKNPTGGAE AEARFKQITE AYEVLSDPEK RAIYDQYGEE GLKGMPPPGS QSRTSTASGS TGPNNFRYNP
101: SDPDEFFNEF MASNKPYTFG QDRRRFQPAH RTSATNGRSE ASSSSQKEPG TSTSHLEKPP PVEKTLLCTL EELYNGTKRK MKITRNVAKS DGKVEVETEI
201: LQVEVLPGWK KGTKMTFPNK GDTLPGYLPQ DLTFVIDMKP HDTYTLEGNN LLVSQEIPLV DALAGTTINL RTLDGRSLPV RVEEVVRPGQ EIVIENEGWP
301: IRKEPGTPPP PPKGSLRIRF DVAFPVRLSS SQRAAIRRIM GS
101: SDPDEFFNEF MASNKPYTFG QDRRRFQPAH RTSATNGRSE ASSSSQKEPG TSTSHLEKPP PVEKTLLCTL EELYNGTKRK MKITRNVAKS DGKVEVETEI
201: LQVEVLPGWK KGTKMTFPNK GDTLPGYLPQ DLTFVIDMKP HDTYTLEGNN LLVSQEIPLV DALAGTTINL RTLDGRSLPV RVEEVVRPGQ EIVIENEGWP
301: IRKEPGTPPP PPKGSLRIRF DVAFPVRLSS SQRAAIRRIM GS
001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SY77]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.