Factsheet for Bra024699.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013046.1-P	Field mustard	cytosol	91.27	97.62
Bra035470.1-P	Field mustard	cytosol	98.97	96.98
Bra018725.1-P	Field mustard	cytosol	54.45	92.17
Bra001457.1-P	Field mustard	cytosol	92.47	91.84
Bra009583.1-P	Field mustard	cytosol	88.36	85.71
Bra035909.1-P	Field mustard	cytosol	83.73	85.49
Bra009584.1-P	Field mustard	cytosol	79.45	83.91
Bra038734.1-P	Field mustard	cytosol	91.78	82.46
Bra026084.1-P	Field mustard	cytosol	81.85	73.88
Bra016644.1-P	Field mustard	cytosol	81.34	73.08
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	57.36	65.05
TraesCS6D01G402500.1	Wheat	cytosol	56.85	64.09
Bra015047.1-P	Field mustard	endoplasmic reticulum	65.07	57.06
Bra028521.1-P	Field mustard	endoplasmic reticulum	64.73	56.84
Bra022819.1-P	Field mustard	endoplasmic reticulum	64.9	56.65
Bra023110.1-P	Field mustard	endoplasmic reticulum	60.62	55.14
Bra031657.1-P	Field mustard	endoplasmic reticulum	60.62	52.6
Bra002461.1-P	Field mustard	cytosol	42.81	47.08
Bra028628.1-P	Field mustard	mitochondrion	49.66	42.65
Bra006027.1-P	Field mustard	mitochondrion	49.49	42.44
Bra010620.1-P	Field mustard	mitochondrion	48.29	41.72
Bra011794.1-P	Field mustard	mitochondrion	48.46	41.5
Bra013786.1-P	Field mustard	plastid	48.46	39.8
Bra010498.1-P	Field mustard	plastid	48.46	39.47
Bra019231.1-P	Field mustard	plastid	47.95	39.44

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EnsemblPlantsGene:Bra024699
EnsemblPlants:Bra024699.1	EnsemblPlants:Bra024699.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	UniProt:M4E7E4	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
UniParc:UPI000254280B	SEG:seg	:	:	:	:

Description

AT5G02500 (E=8e-263) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding

Coordinates

chrA09:+:23433545..23435722

Molecular Weight (calculated)

63647.4 Da

IEP (calculated)

4.693

GRAVY (calculated)

-0.427

Length

584 amino acids

Sequence
(BLAST)

001: MSGGKGEGPA IGIDLGTTYS CVGVWQHDRV EIIANDQGNR TTPSYVAFTD SERLIGDAAK NQVAMNPINT VFAYLGVTIK NAVVTVPAYF NDSQRQATKD
101: AGVIAGLNVM RIINEPTAAA IAYGLDKKAT SVGEKNVLIF DLGGGTFDVS LLTIEEGIFE VKATAGDTHL GGEDFDNRMV NHFVQEFKRK SKKDISGNPR
201: ALRRLRTACE RAKRTLSSTA QTTIEIDSLF EGIDFYSALT RARFEELNMD LFRKCMEPVE KCLRDAKMDK STVHDVVLVG GSTRIPKVQQ LLQDFFNGKE
301: LCKSINPDEA VAYGAAVQGA ILSGEGNEKV QDLLLLDVTP LSLGLETAGG VMTTLIQRNT TIPTKKEQVF STYSDNQPGV LIQVYEGERA RTKDNNLLGK
401: FELSGIPPAP RGVPQITVCF DIDANGILNV SAEDKTTGQK NKITITNDKG RLSKDEIEKM VQEAEKYKSE DEEHKKKVEA KNALENYAYN MRNTIRDDKI
501: GEKLPAADKK KIEDSVEEAI QWLDGNQLAE AEEFEDKMKE LEGVCNPIIA KMYQGAGGEA GGPADDDEAP PAAGGAGPKI EEVD

Best Arabidopsis Sequence Match ( AT5G02500.1 )
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDSSVQSDM KLWPFKIQAG
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED
601: KMKELESICN PIIAKMYQGA GGEAGGPGAS GMDDDAPPAS GGAGPKIEEV D

Arabidopsis Description

MED37EProbable mediator of RNA polymerase II transcription subunit 37e [Source:UniProtKB/Swiss-Prot;Acc:P22953]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.