Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048687_P002 | Maize | cytosol, extracellular, plasma membrane | 77.99 | 78.45 |
| TraesCS6D01G322700.1 | Wheat | cytosol | 52.7 | 60.8 |
| AT1G56410.1 | Thale cress | cytosol | 70.85 | 59.48 |
| TraesCS6D01G322800.1 | Wheat | cytosol | 58.88 | 59.45 |
| TraesCS4D01G207100.1 | Wheat | cytosol | 55.79 | 59.34 |
| TraesCS4D01G140800.1 | Wheat | cytosol, nucleus | 73.94 | 59.1 |
| TraesCS5D01G093900.1 | Wheat | cytosol, mitochondrion, nucleus | 73.55 | 58.89 |
| TraesCS3D01G352400.2 | Wheat | cytosol, golgi | 73.36 | 58.73 |
| TraesCS6D01G317700.1 | Wheat | cytosol | 73.17 | 58.58 |
| AT5G02500.1 | Thale cress | cytosol | 73.55 | 58.53 |
| TraesCS4D01G207500.1 | Wheat | cytosol | 73.55 | 58.53 |
| TraesCS5D01G492900.2 | Wheat | cytosol | 72.97 | 58.33 |
| TraesCS1D01G284000.2 | Wheat | cytosol, golgi | 72.97 | 58.33 |
| TraesCS3D01G351900.1 | Wheat | cytosol | 73.36 | 58.28 |
| Bra035909.1-P | Field mustard | cytosol | 64.09 | 58.04 |
| Bra013046.1-P | Field mustard | cytosol | 61.0 | 57.88 |
| AT3G09440.2 | Thale cress | cytosol | 72.39 | 57.78 |
| Bra009583.1-P | Field mustard | cytosol | 66.22 | 56.98 |
| AT5G02490.1 | Thale cress | cytosol | 71.81 | 56.97 |
| Bra024699.1-P | Field mustard | cytosol | 64.09 | 56.85 |
| TraesCS4D01G206600.1 | Wheat | cytosol | 72.01 | 56.77 |
| Bra035470.1-P | Field mustard | cytosol | 63.9 | 55.54 |
| Bra009584.1-P | Field mustard | cytosol | 57.53 | 53.89 |
| Bra018725.1-P | Field mustard | cytosol | 31.85 | 47.83 |
| CDY40362 | Canola | cytosol, mitochondrion | 41.7 | 47.58 |
| TraesCS5D01G305500.1 | Wheat | endoplasmic reticulum | 55.21 | 47.04 |
| TraesCS6D01G339700.1 | Wheat | cytosol | 53.47 | 46.09 |
| TraesCS3D01G262800.1 | Wheat | cytosol | 51.93 | 43.81 |
| TraesCS7D01G423100.1 | Wheat | endoplasmic reticulum | 55.6 | 43.64 |
| TraesCS6D01G049100.1 | Wheat | golgi | 55.6 | 43.31 |
| TraesCS2D01G600900.1 | Wheat | endoplasmic reticulum | 53.67 | 41.62 |
| TraesCS1D01G452500.1 | Wheat | cytosol | 38.8 | 38.73 |
| TraesCS2D01G575200.1 | Wheat | mitochondrion, plastid | 46.53 | 35.7 |
| TraesCS3D01G296700.1 | Wheat | golgi | 46.91 | 35.58 |
| TraesCS5D01G276100.1 | Wheat | mitochondrion | 46.14 | 34.94 |
| TraesCS1D01G131800.1 | Wheat | plastid | 45.17 | 34.31 |
| TraesCS5D01G117600.1 | Wheat | plastid | 44.21 | 33.19 |
| TraesCS6D01G339800.1 | Wheat | nucleus | 48.46 | 31.65 |
| TraesCS6D01G339600.1 | Wheat | cytosol | 55.6 | 31.03 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G402500.1 | EnsemblPlantsGene:TraesCS6D01G402500 | Gene3D:2.60.34.10 | Gene3D:3.30.30.30 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 |
| InterPro:HSP70_peptide-bd_sf | InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | InterPro:IPR029047 | ncoils:Coil | PANTHER:PTHR19375 |
| PANTHER:PTHR19375:SF323 | PFAM:PF00012 | PRINTS:PR00301 | ScanProsite:PS00297 | ScanProsite:PS00329 | ScanProsite:PS01036 |
| SEG:seg | SUPFAM:SSF100920 | SUPFAM:SSF53067 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:-:470902402..470907928
Molecular Weight (calculated)
57283.7 Da
IEP (calculated)
5.293
GRAVY (calculated)
-0.188
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAWEGAIGI DLGTTYSCVA VWQNGHVEIV ANEQGNRTTP SYVAFTSSKR LIGDAAKNQA DMNPANTIFD SKRLIGRRFT DASVQNDIKH WPFKVISGPE
101: DKPMIAVKYK GVEQQFAAEE ISSMVLVRMR ETAEAYLGST IKNAVVTVPA CSTDLQRQAT WNAGVLASLN VMRIIPEPTA AAMAYGLHNK VTEWGVVENA
201: LVFDLGGGTF DVSLVEIEFY IFEVLATAGD PHLGGEDFDN RMVNHFVQEF KRKKKKDISG NPRALRRLRT ACERAKRTLS STEEAVIEIS CLYEDIDFYS
301: TITRARFEEL NMDLFRKCMD IVEDCLRDAR MDMSSVHAVV LIGGSSRIPK IQQLLQELFN GKELYKSINP DEAVAYGAAL QAALLTGPNN DNEGWMSDLL
401: LLDATPLSLG LGTKGGDMTV MIPKNRAIPV KTEIVISTDY DNQPCIRIQV YEGEGAKTCD NNLLGEFEFS IPPASKGVPQ IIVCFDIDAN GILDVSAKDK
501: NTGEKKKVTI NKRFHLKQ
101: DKPMIAVKYK GVEQQFAAEE ISSMVLVRMR ETAEAYLGST IKNAVVTVPA CSTDLQRQAT WNAGVLASLN VMRIIPEPTA AAMAYGLHNK VTEWGVVENA
201: LVFDLGGGTF DVSLVEIEFY IFEVLATAGD PHLGGEDFDN RMVNHFVQEF KRKKKKDISG NPRALRRLRT ACERAKRTLS STEEAVIEIS CLYEDIDFYS
301: TITRARFEEL NMDLFRKCMD IVEDCLRDAR MDMSSVHAVV LIGGSSRIPK IQQLLQELFN GKELYKSINP DEAVAYGAAL QAALLTGPNN DNEGWMSDLL
401: LLDATPLSLG LGTKGGDMTV MIPKNRAIPV KTEIVISTDY DNQPCIRIQV YEGEGAKTCD NNLLGEFEFS IPPASKGVPQ IIVCFDIDAN GILDVSAKDK
501: NTGEKKKVTI NKRFHLKQ
001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD
Arabidopsis Description
HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.