Factsheet for TraesCS4A01G442100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6D01G402500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07220.1	TraesCS6D01G402500.1	AT5G02500.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G055400.1	Wheat	mitochondrion	94.59	96.23
TraesCS7D01G050300.1	Wheat	cytosol	89.17	92.6
HORVU7Hr1G010230.1	Barley	mitochondrion	90.88	89.36
Zm00001d035999_P002	Maize	mitochondrion	63.82	70.89
EER87751	Sorghum	cytosol	67.81	68.59
Os06t0126500-01	Rice	cytosol	65.81	68.14
Zm00001d045513_P001	Maize	cytosol, mitochondrion	61.82	67.39
GSMUA_Achr3P12380_001	Banana	cytosol	39.6	50.92
GSMUA_Achr3P14600_001	Banana	cytosol	42.17	50.17
GSMUA_Achr1P07950_001	Banana	cytosol	41.03	48.48
TraesCS7A01G269600.2	Wheat	cytosol	44.16	47.99
TraesCS5A01G312500.1	Wheat	cytosol	45.3	46.76
GSMUA_Achr1P18860_001	Banana	cytosol	37.04	45.77
GSMUA_Achr4P19700_001	Banana	cytosol	32.48	44.53
GSMUA_Achr7P05880_001	Banana	cytosol	39.89	42.81
KRH38607	Soybean	cytosol	37.04	38.24
Bra029142.1-P	Field mustard	cytosol	35.61	38.11
CDY38897	Canola	cytosol	35.61	38.11
CDY68101	Canola	cytosol	35.33	38.04
TraesCS2A01G463500.1	Wheat	cytosol	29.06	37.92
Solyc03g026220.2.1	Tomato	cytosol	36.75	37.83
PGSC0003DMT400065070	Potato	cytosol	35.61	37.65
VIT_16s0100g00470.t01	Wine grape	cytosol	36.75	37.61
Solyc06g035720.2.1	Tomato	cytosol	35.33	37.58
CDY67495	Canola	cytosol	34.76	37.31
CDX98996	Canola	cytosol	32.48	37.25
CDX70017	Canola	cytosol	32.48	37.13
Bra009283.1-P	Field mustard	cytosol, plastid	32.48	37.13
PGSC0003DMT400037124	Potato	cytosol	35.9	36.95
CDY27085	Canola	cytosol	33.9	36.39
AT5G52060.1	Thale cress	cytosol	35.33	36.26
AT5G07220.1	Thale cress	cytosol	31.05	35.97
KRH03982	Soybean	cytosol	27.92	35.77
KRH09137	Soybean	cytosol	31.05	35.5
KRH38609	Soybean	cytosol, plastid	35.61	35.41
KRH09139	Soybean	cytosol, plastid	35.61	35.31
KRH57254	Soybean	cytosol	27.64	35.27
Bra022577.1-P	Field mustard	cytosol	34.76	34.86
Solyc08g080320.2.1	Tomato	cytosol, plastid	27.35	34.78
TraesCS3A01G350700.1	Wheat	cytosol	26.5	34.7
Bra029288.1-P	Field mustard	cytosol	29.34	34.68
PGSC0003DMT400058588	Potato	cytosol	27.92	34.63
CDY30694	Canola	cytosol	29.06	34.34
CDY30692	Canola	cytosol	29.06	34.34
TraesCS2A01G322100.1	Wheat	mitochondrion	15.95	32.94
AT5G62100.1	Thale cress	cytosol	27.64	32.77
TraesCS2A01G321700.1	Wheat	mitochondrion	15.38	31.95
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	15.67	31.61
TraesCS2A01G321800.1	Wheat	mitochondrion	15.38	31.58
TraesCS6A01G211300.1	Wheat	mitochondrion	13.96	31.01
TraesCS3A01G390300.1	Wheat	mitochondrion	13.96	30.25
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	14.53	30.18
KRH35375	Soybean	cytosol	21.94	28.52
TraesCS3A01G390600.1	Wheat	mitochondrion	13.11	28.4
TraesCS3A01G390400.1	Wheat	mitochondrion	13.11	28.4
TraesCS3A01G390500.1	Wheat	mitochondrion	13.11	27.88
KRH44514	Soybean	cytosol, plastid	13.68	25.81

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF20
SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	EnsemblPlantsGene:TraesCS4A01G442100	EnsemblPlants:TraesCS4A01G442100.1	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:710243465..710244619

Molecular Weight (calculated)

37537.1 Da

IEP (calculated)

10.536

GRAVY (calculated)

-0.492

Length

351 amino acids

Sequence
(BLAST)

001: MLGVRKGAAT VELGSLTMRR KGAPPPPPPV VPVEEGKKAP AVAVGTGKVS AEEVWEVRPG GMLVQKRGPE EDEPAPESVK PVPTIRVKAR LAGKTHEIYV
101: SAEATFGDLR RRVAERAGAH PEDLRTLYKG KEQDPKAFLD MAGVRDRSKV AVVDDPEARA RRLLEELRLG SLRKAAGAVA AVAAEVDKIA PKVSALEASV
201: RKGEKVAEKD VATVTELLMN ELLKLDAVVA GGDVKAQRRV QVKRVQKYVE TLDAVMAKNA TIASKPAAAK KQPPQPAPAR QQQPPQSQRQ RHPTAPPQAQ
301: APAQTTRWEM FDLLSSLPTT SSSSSTTTTD SSTASSAGAP PPPTNRLDWM L

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.