Factsheet for GSMUA_Achr3P12380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P19700_001	Banana	cytosol	73.26	78.12
GSMUA_Achr3P14600_001	Banana	cytosol	81.69	75.59
GSMUA_Achr7P05880_001	Banana	cytosol	85.35	71.25
GSMUA_Achr1P18860_001	Banana	cytosol	71.79	69.01
GSMUA_Achr1P07950_001	Banana	cytosol	72.53	66.67
Zm00001d035816_P001	Maize	cytosol, plastid	38.46	63.25
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	34.8	59.38
Os09t0524800-01	Rice	cytosol, mitochondrion	65.2	53.29
KXG36034	Sorghum	cytosol	64.47	53.01
Zm00001d021221_P001	Maize	cytosol	64.47	52.69
Zm00001d031732_P001	Maize	cytosol	61.54	52.5
Zm00001d018265_P001	Maize	cytosol	59.71	52.08
Os08t0546100-00	Rice	cytosol	59.34	51.27
EES14129	Sorghum	cytosol	61.54	51.06
HORVU7Hr1G056700.2	Barley	cytosol	59.71	50.46
TraesCS7A01G269600.2	Wheat	cytosol	59.34	50.15
TraesCS7B01G167800.1	Wheat	cytosol	58.97	49.85
TraesCS7D01G270100.1	Wheat	cytosol	58.97	49.85
Zm00001d052733_P001	Maize	cytosol	56.41	49.84
KRH09137	Soybean	cytosol	55.31	49.19
Zm00001d035999_P002	Maize	mitochondrion	56.41	48.73
KRH38607	Soybean	cytosol	60.44	48.53
Zm00001d006173_P001	Maize	cytosol	61.9	48.42
TraesCS5A01G312500.1	Wheat	cytosol	59.71	47.94
Zm00001d045513_P001	Maize	cytosol, mitochondrion	56.41	47.83
VIT_16s0100g00470.t01	Wine grape	cytosol	59.71	47.52
TraesCS5D01G319300.2	Wheat	cytosol	60.44	47.01
HORVU5Hr1G080500.1	Barley	cytosol	60.07	46.99
PGSC0003DMT400065070	Potato	cytosol	57.14	46.99
KRH09139	Soybean	cytosol, plastid	60.81	46.89
KRH38609	Soybean	cytosol, plastid	60.07	46.46
Os06t0126500-01	Rice	cytosol	57.51	46.31
Solyc06g035720.2.1	Tomato	cytosol	55.68	46.06
TraesCS5B01G313500.1	Wheat	cytosol	59.71	46.05
CDX70017	Canola	cytosol	51.65	45.93
Bra009283.1-P	Field mustard	cytosol, plastid	51.65	45.93
GSMUA_Achr7P03430_001	Banana	cytosol	42.12	45.82
CDX98996	Canola	cytosol	51.28	45.75
Solyc08g080320.2.1	Tomato	cytosol, plastid	46.15	45.65
EER87751	Sorghum	cytosol	57.88	45.53
AT5G07220.1	Thale cress	cytosol	50.18	45.21
Bra029288.1-P	Field mustard	cytosol	49.08	45.12
CDY30692	Canola	cytosol	49.08	45.12
CDY30694	Canola	cytosol	49.08	45.12
CDY68101	Canola	cytosol	53.85	45.09
PGSC0003DMT400058588	Potato	cytosol	46.52	44.88
CDY38897	Canola	cytosol	53.85	44.82
Bra029142.1-P	Field mustard	cytosol	53.85	44.82
GSMUA_Achr3P23280_001	Banana	cytosol	42.12	44.75
Solyc03g026220.2.1	Tomato	cytosol	55.68	44.57
CDY67495	Canola	cytosol	52.75	44.04
CDY27085	Canola	cytosol	52.38	43.73
AT5G52060.1	Thale cress	cytosol	54.21	43.27
AT5G62100.1	Thale cress	cytosol	46.89	43.24
PGSC0003DMT400037124	Potato	cytosol	53.85	43.11
KRH57254	Soybean	cytosol	42.86	42.55
HORVU5Hr1G080560.1	Barley	peroxisome	43.22	42.29
KRH03982	Soybean	cytosol	42.12	41.97
Bra022577.1-P	Field mustard	cytosol	52.75	41.14
TraesCS7D01G050300.1	Wheat	cytosol	50.55	40.83
GSMUA_AchrUn_...	Banana	cytosol	35.53	40.76
TraesCS7A01G055400.1	Wheat	mitochondrion	51.28	40.58
TraesCS4A01G442100.1	Wheat	mitochondrion	50.92	39.6
HORVU7Hr1G010230.1	Barley	mitochondrion	51.28	39.22
KRH35375	Soybean	cytosol	37.36	37.78
GSMUA_Achr4P16720_001	Banana	cytosol	28.94	36.92
KRH44514	Soybean	cytosol, plastid	24.18	35.48
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	19.41	34.87
GSMUA_AchrUn_...	Banana	cytosol	16.85	30.46

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	EnsemblPlantsGene:GSMUA_Achr3G12380_001	EnsemblPlants:GSMUA_Achr3P12380_001	EnsemblPlants:GSMUA_Achr3T12380_001
InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	UniProt:M0SE05	PFAM:PF00240	PFAM:PF02179
PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF11	SMART:SM00264	SUPFAM:SSF54236
SUPFAM:SSF63491	UniParc:UPI000296F0CE	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_100.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr3G12380_001]

Coordinates

chr3:-:9155745..9157201

Molecular Weight (calculated)

29981.3 Da

IEP (calculated)

10.194

GRAVY (calculated)

-0.294

Length

273 amino acids

Sequence
(BLAST)

001: MRSKTGGRTV AFSPIKESPA AAEKAAGWEV RPCGMLVQKR GADADATAAP VPTIRVKVKH GSVYHEIYVS SQATFGELKK ALSAKTGLHP LDMKLLYKDK
101: ERESTAFLDT AGVKDKSKVV LEEDPTAQAK RLLEMRKTDK MEKATKSISA ISLEVDRLAS KVSALEAIVN RGGRVVEHDV TNLIESLMNE LIKLDAVVAD
201: GDVKLQRRMQ IKRVQKYVET LDAVKIKNAM PRAKVVVTTK WETFDSLLFV PSTSTSTAAA SSAPHARFDW EPF

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.